| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1976 |
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| Symbol | |
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| ID | 8725713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 2384855 |
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| End bp | 2387614 |
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| Gene Length | 2760 bp |
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| Protein Length | 919 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | conjugative relaxase domain protein |
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| Protein accession | YP_003386820 |
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| Protein GI | 284036890 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.353568 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0542382 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCAGA GCCATTCGGC CAGTGGGGCC AAAAGCTATT TTTCGCAAGC GTTGGCGAAG
GCTGACTATT ATTTAAACGA TCAGGAATTA CAGGGGGTCA TGCACGGAAA ACTGGCCGAA
CGGCTTGGAC TGACGGGCCC GGTGAACAAA GACGTTTTCT TTGATTTATG CGATAACGTC
AATCCCGCGA CCGGGAAATC TATGACGCCC CGCACCAATG AGCACCGAAC GGTCGGTTAT
GATATTAACT TCCATTGTCC GAAAGAACTT TCGATCCTGC ATGCGCTCTC GAACGATCTG
CATATTCTGG AAGCGTTTCA GAAGTCGGTG AGTGAAACCA TGCAGGACAT TGAACGCGAC
GCCAAAACGC GTGTACGTAA GGATAAATCC GTTGCGGAAC GGGATACGGG TGAACTGCTT
TACTCCACCT TTATTCATCA AACGGCAAGA CCGGTCGCGG GGCATTTACC TGACCCCCAC
CTTCACGCGC ACTGCTTTGT TTTTAACGCG ACATGGGACG CGGAAGAGCA GCAGATCAAG
GCGGTTCAGT TCCGGGACAT TAACCGGGAT ATGCCCTATT ATCAGGCCCG TTTTCACAAA
CGATTATCCG ATAACCTGAT CGAACAGGGC TATCAAATCC GGCGGACGGA TAAGGCTTTC
TCCGTAGACG GCGTCCCACA AAGGGTGGTC GATTTGTTTA GCAAACGCAC CAATGAGATT
GGCCGGATTG CCAAAGAAAA AGGCATTACG GACATCGATG AACTCGGCGC ATTGGGTGCG
CGTACCCGGT CTAAGAAACA GGTCGGACAT ACGATGGCCG AACTGAAAGC CGAATGGCGC
AAACAAATTC AGGAATTCGG CCCCGACGAT GAGGGGGATG GTAAACGGAT TGTTCGCTTT
GCGCCCGTCC GTAATCCGTC TGATCTCACG CTTGACCGTT GTGTTGACCA TGCTCTCGAC
CACGGCTTTG AACGGGCGTC AGTGGTGCAG GATCGCCGGT TACTGGCCTC CGCCTACCGG
CATAGTGTCG GAACATCATC ACTGACACTG GATGCAATCA CGGATAAGTT CACAAACGAC
GAACGGCTCA TTCATGTCAA AGAGCATGAC CGGGTTCTCT GCACAACAAA ACAAGTGCTA
GCGGAAGAGG CTCGCATGGT CAGCCTGGCC CGCGCCGGTC AGGGCAAACT TAAACCGCTC
TATCAAAAAG CCCCGGACTT GACTTTGGAT GGTCAACAGG CGGATGCGGT AAAACACGTT
TTGACCACCA CCCATCGGGT GTCGATCATC AGGGGTGCTG CCGGGTCTGG CAAGACCACC
CTGATGCGTG AAGCACTTGA CCATATGAAA CAGGCAGGCA AGACCGTGAC GGTCGTGGCA
CCAACCTCAG AAGCCTCACG GGGCGTCCTA CGGGACGAAG GGTTTGCCGA AGCGGAAACG
GTCGCCAAAC TACTGAGCGA CAAATCCATG CAAGATCAGC TAGACAATCA AATCCTGTGG
GTCGATGAAG CGGGGCTGCT CGGTACTCAG GATATGACCG CACTGCTGGC ACTGGCGCAG
GAGAAAAATG CCCGACTGAT TTTGGGCGGT GATACGAAGC AGCATGCCTC GGTCGTGCGC
GGAGACGCGC TACGTATACT CAACACCGTT GGCGGCATTC AAACGGCTGA GGTCAGCAAA
ATTTATCGGC AACGGAATGC CGATTACCGC ACGGCTGTAG AGTATCTGGC CAATGGCGCA
ATCAAACAGG GGTTTGAAAA GCTTGACAGC ATCAATGCGA TACAAACCAG CGACCCGCTT
AAGCCACATG ACACTTTGGT TAAAGATTAC ATGGCAACAA TCAAAAAAGG CAAATCCGCC
CTGGTTGTGT CCCCTACTCA CCAAAATAGT GATGCTGTCA CCGAAGTCAT TCGGGAGAAA
ATGAAAGCAA CAGGTATGCT TGGTAAAAAA GACTATCTCC TCCCCCGCCT GACCAGTTTA
AATCTGACGG AAGCCGAAAA AGCAGACTGG CGTAATTTGA AGACAGGTCA GCTCATTCAG
TTCAATCAGA ATTTGCCCGG CATTAAACGC GGGAGCCGAT GGATAATCGA GAATAGTTCA
GACAAAGGTG TCTTTATCCA GAATGAGGAA AAACAAATCC TGCCGCTGCC TACCTTGAAA
AGCCGTGATT TTGATGTGTA CAACCGAAGC GATATAAATC TTGCGAAAGG CGACACGATC
CGCATCACTC GCAACGGATT TGATCAGGAA AAGAACAGGC TCAATAATGG TCAGCTACTG
GATGTTTTGT CCATCAGTAA AAACGGCGAA CTGCACGTGC GCAATCGTAC GAGCAAGGCG
GATTACAAAT TGGACAGCCA GTACGGTCAT CTGACCCATG CCTATTGCAT TACATCGCAT
GCTGCACAGG GGAAAACAGT CGATGAGGTG TTCATCACTC AACCAGCCAG CACCTTTCCG
GCAACGGATG CCAAACAATT TTACGTGTCA GTGTCTAGGG GTCGTGACCG GGCACGTATT
TATACCGATG ACAAAGAGCA ATTGCTTGAC CATGCCGCAC GACTTGGCGA CCGGCCATCT
GCTTCCGAGC TGGTGAAGCG AAAAAACCAG ACGGTTGATA TGGCCCAGCA GCGTATTCGG
GATGACTTAA GTCGCACAAC CGACCGCGCT AGCCGACCGA AAGAAAGTAC CAAACCATTT
AAAGCGCCAG TTCCATCCAC TAAAAAAGCA AAAGATCGTG ATCATGAGCC AGAGCTTTAA
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| Protein sequence | MIQSHSASGA KSYFSQALAK ADYYLNDQEL QGVMHGKLAE RLGLTGPVNK DVFFDLCDNV
NPATGKSMTP RTNEHRTVGY DINFHCPKEL SILHALSNDL HILEAFQKSV SETMQDIERD
AKTRVRKDKS VAERDTGELL YSTFIHQTAR PVAGHLPDPH LHAHCFVFNA TWDAEEQQIK
AVQFRDINRD MPYYQARFHK RLSDNLIEQG YQIRRTDKAF SVDGVPQRVV DLFSKRTNEI
GRIAKEKGIT DIDELGALGA RTRSKKQVGH TMAELKAEWR KQIQEFGPDD EGDGKRIVRF
APVRNPSDLT LDRCVDHALD HGFERASVVQ DRRLLASAYR HSVGTSSLTL DAITDKFTND
ERLIHVKEHD RVLCTTKQVL AEEARMVSLA RAGQGKLKPL YQKAPDLTLD GQQADAVKHV
LTTTHRVSII RGAAGSGKTT LMREALDHMK QAGKTVTVVA PTSEASRGVL RDEGFAEAET
VAKLLSDKSM QDQLDNQILW VDEAGLLGTQ DMTALLALAQ EKNARLILGG DTKQHASVVR
GDALRILNTV GGIQTAEVSK IYRQRNADYR TAVEYLANGA IKQGFEKLDS INAIQTSDPL
KPHDTLVKDY MATIKKGKSA LVVSPTHQNS DAVTEVIREK MKATGMLGKK DYLLPRLTSL
NLTEAEKADW RNLKTGQLIQ FNQNLPGIKR GSRWIIENSS DKGVFIQNEE KQILPLPTLK
SRDFDVYNRS DINLAKGDTI RITRNGFDQE KNRLNNGQLL DVLSISKNGE LHVRNRTSKA
DYKLDSQYGH LTHAYCITSH AAQGKTVDEV FITQPASTFP ATDAKQFYVS VSRGRDRARI
YTDDKEQLLD HAARLGDRPS ASELVKRKNQ TVDMAQQRIR DDLSRTTDRA SRPKESTKPF
KAPVPSTKKA KDRDHEPEL
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