Gene Slin_1970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1970 
Symbol 
ID8725707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2380780 
End bp2381700 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content48% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003386814 
Protein GI284036884 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0951482 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0521635 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATCG TCATGGACAT TGAACATGCG AACACAATTC CTATTGCCGA AATTCTGACC 
AAGCTTGGCC GTAAACCCAG TCATACCAAC AACCACAAAC ATCGGTATCT CTCGCCCTTA
CGCAACGAAA AAACAGCCAG TTTTCATCTG AACACGAAAA CCAACCGCTG GCATGATTTC
GGGGAGGGCA TTGGCGGTGA CACGGTCAAT TTTGTTCGGG CTTATCTGAA AGCGACCAAA
GAAGCCGATA CCACATCTGA TGCCCTGCGC TGGATCAACA ATATGGCCGT TGGCCATTAT
CAAATTGCGC CCGGCTTGAT CGAGGATGTT CCGAAAGATC CACCTTCACT GTGCTTAAAA
AACAGTCAGT CCGTTCAACA ACTGGGTCTG GTGCATTATC TCGCCAAACG CGGCATTCCG
CTCACCATTG CGCGGCAGCG TTTGAAAGAA GTGTATGTCT GTAATCAAAA TACGCGCAAA
AGCTTTTATG CGTTAGGCTT TCCCAACGAG GAGGGCGGGT TTGAACTGCG TAATCCGTTC
TTCAAGGGCA GCCTGGGCGC TAAATCCATT TCCTTTATTC GCGGGACAGA CCCAAAGCCG
CAGGGCATCC ATTTGTTTGA AGGCTTCATG GATTATCTAT CTGCCATTGT GCAGTTGAAA
GGCAAAGGAT TTAAAGAGGA CGTTATCGTT CTTAACTCCA TTGCCTGTCT GAAACAGGCC
TTTTCCTATA TGCACAATTA CGGCTATCGC GTCGCTTACA CCTGGATGGA TAATGATCCA
GCCGGTGAGA AAGCCACCGC AGTTTTGTCA GACTTTATCA AAACGCAGGA CAGCATGGTT
CATACAAGCA TGAACAAGGT TTATGCCCCG CACAAGGATG TCAATGCGTG GCACATGCAT
CGACACAACC TGACTTTGTA A
 
Protein sequence
MEIVMDIEHA NTIPIAEILT KLGRKPSHTN NHKHRYLSPL RNEKTASFHL NTKTNRWHDF 
GEGIGGDTVN FVRAYLKATK EADTTSDALR WINNMAVGHY QIAPGLIEDV PKDPPSLCLK
NSQSVQQLGL VHYLAKRGIP LTIARQRLKE VYVCNQNTRK SFYALGFPNE EGGFELRNPF
FKGSLGAKSI SFIRGTDPKP QGIHLFEGFM DYLSAIVQLK GKGFKEDVIV LNSIACLKQA
FSYMHNYGYR VAYTWMDNDP AGEKATAVLS DFIKTQDSMV HTSMNKVYAP HKDVNAWHMH
RHNLTL