Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1970 |
Symbol | |
ID | 8725707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 2380780 |
End bp | 2381700 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003386814 |
Protein GI | 284036884 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0951482 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0521635 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGATCG TCATGGACAT TGAACATGCG AACACAATTC CTATTGCCGA AATTCTGACC AAGCTTGGCC GTAAACCCAG TCATACCAAC AACCACAAAC ATCGGTATCT CTCGCCCTTA CGCAACGAAA AAACAGCCAG TTTTCATCTG AACACGAAAA CCAACCGCTG GCATGATTTC GGGGAGGGCA TTGGCGGTGA CACGGTCAAT TTTGTTCGGG CTTATCTGAA AGCGACCAAA GAAGCCGATA CCACATCTGA TGCCCTGCGC TGGATCAACA ATATGGCCGT TGGCCATTAT CAAATTGCGC CCGGCTTGAT CGAGGATGTT CCGAAAGATC CACCTTCACT GTGCTTAAAA AACAGTCAGT CCGTTCAACA ACTGGGTCTG GTGCATTATC TCGCCAAACG CGGCATTCCG CTCACCATTG CGCGGCAGCG TTTGAAAGAA GTGTATGTCT GTAATCAAAA TACGCGCAAA AGCTTTTATG CGTTAGGCTT TCCCAACGAG GAGGGCGGGT TTGAACTGCG TAATCCGTTC TTCAAGGGCA GCCTGGGCGC TAAATCCATT TCCTTTATTC GCGGGACAGA CCCAAAGCCG CAGGGCATCC ATTTGTTTGA AGGCTTCATG GATTATCTAT CTGCCATTGT GCAGTTGAAA GGCAAAGGAT TTAAAGAGGA CGTTATCGTT CTTAACTCCA TTGCCTGTCT GAAACAGGCC TTTTCCTATA TGCACAATTA CGGCTATCGC GTCGCTTACA CCTGGATGGA TAATGATCCA GCCGGTGAGA AAGCCACCGC AGTTTTGTCA GACTTTATCA AAACGCAGGA CAGCATGGTT CATACAAGCA TGAACAAGGT TTATGCCCCG CACAAGGATG TCAATGCGTG GCACATGCAT CGACACAACC TGACTTTGTA A
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Protein sequence | MEIVMDIEHA NTIPIAEILT KLGRKPSHTN NHKHRYLSPL RNEKTASFHL NTKTNRWHDF GEGIGGDTVN FVRAYLKATK EADTTSDALR WINNMAVGHY QIAPGLIEDV PKDPPSLCLK NSQSVQQLGL VHYLAKRGIP LTIARQRLKE VYVCNQNTRK SFYALGFPNE EGGFELRNPF FKGSLGAKSI SFIRGTDPKP QGIHLFEGFM DYLSAIVQLK GKGFKEDVIV LNSIACLKQA FSYMHNYGYR VAYTWMDNDP AGEKATAVLS DFIKTQDSMV HTSMNKVYAP HKDVNAWHMH RHNLTL
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