Gene Slin_1924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1924 
Symbol 
ID8725661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2330900 
End bp2332225 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content51% 
IMG OID 
ProductABC-1 domain protein 
Protein accessionYP_003386768 
Protein GI284036838 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCC AGACATCCGT TCCAACAGGA AAAGTTGCGC GTGCCAGTCA GTTTATGAAG 
GCTGGGGTAA AAGTTGGCGG TAACTATATC AAGCATTATA GTAAGAAGCT GATGGACCCC
AGTTTGTCGA AAGATGAACT TCACAAGGAT AATGCGGCCG ATATTTACGA CGCCCTCAGT
GAGTTGAAGG GATCGGCTCT TAAAATGGCT CAGATGCTGA GCATGGACCG GGGACTGTTG
CCAGTAGCGT ATTCCGATAA GTTTACTATG GCCCAGTACT CGGCCCCGCC CTTGTCGGGA
CCGCTGGTAG TGAAGACGTT TAAAACGTAC TTTGGCAAAA CACCCGCTCA ACTGTTCGAT
AAGTTCAGCA TCGAGGCCGT GAATGCCGCC AGTATTGGTC AGGTGCATCA GGCCTGGAAG
GATGGTCGGA AACTGGCCGT AAAAGTACAG TACCCCGGTG TTGCCGATGC GGTAAGCTCC
GATTTGAAGA TCGCCAAACC ATTGGCCGTC CGGCTCTTAA ATTTGAACGA ACGCGACATT
GACCGGTACA TGGGCGAAGT AGAGTCCAAA CTGCTGGAAG AAACGGATTA CGAACTCGAA
CTGAAGCGGT CCATCGAAAT TTCGGAAGCC TGTGCCCACA TTTCCGGTCT GGTTTTCCCT
AAATACTACC CTGAGTTATC GTCAAAGCGG ATTTTGACGA TGGACTGGCT CGATGGTCTT
CACCTGAAGG AGTTCATGAA AACGAACCCG TCGCAGGATG TTCGCGACCA GATTGGGCAG
GCGTTGTGGG ACTTTTATGA CTTTCAAATA CACACCCTGC GGCAGGTGCA TGCCGACCCA
CACCCCGGTA ATTTCCTCAT GCGCGCCAAT GGCACCATGG GCGTCATCGA CTTCGGCTGT
GTGAAAGTCA TCCCTGACTT TTACTACGAT AACTACTTCC GGCTCGTTAA CCCCGATACC
CTGGACGATG CGGCCCTGAC GGAAGAAATT TTCGAGAATT TGGAATTTAT CACGGATGAG
GATTCGCCCA AAGAGCGGCA GTTCTTCTCC GATCTGTTTA AAGATATGAC CCGAATGCTG
GCCGAGCCAT TTGCTGTCGA TAGTTTCGAC TTTGGGGACG ATGCCTACTT TAACAAAGTT
TATGCGTTTG CCGAAGGGCT GGCAAATGTG CAGGAATTAA AAAACTCGAA AGTGGCCCGT
GGCTCGCAGG ATGGCCTGTA CGTAAACCGG ACGTACTATG GTCTCTACGC CATGCTGAAT
GAGTTGAAAG CCCGCATCGT AACGACGAAA CCCGAATGGC TGCGGTCGGC GAAAGAGGTT
GCCTGA
 
Protein sequence
MKIQTSVPTG KVARASQFMK AGVKVGGNYI KHYSKKLMDP SLSKDELHKD NAADIYDALS 
ELKGSALKMA QMLSMDRGLL PVAYSDKFTM AQYSAPPLSG PLVVKTFKTY FGKTPAQLFD
KFSIEAVNAA SIGQVHQAWK DGRKLAVKVQ YPGVADAVSS DLKIAKPLAV RLLNLNERDI
DRYMGEVESK LLEETDYELE LKRSIEISEA CAHISGLVFP KYYPELSSKR ILTMDWLDGL
HLKEFMKTNP SQDVRDQIGQ ALWDFYDFQI HTLRQVHADP HPGNFLMRAN GTMGVIDFGC
VKVIPDFYYD NYFRLVNPDT LDDAALTEEI FENLEFITDE DSPKERQFFS DLFKDMTRML
AEPFAVDSFD FGDDAYFNKV YAFAEGLANV QELKNSKVAR GSQDGLYVNR TYYGLYAMLN
ELKARIVTTK PEWLRSAKEV A