| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1913 |
|---|
| Symbol | |
|---|
| ID | 8725650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 2317860 |
|---|
| End bp | 2318507 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003386757 |
|---|
| Protein GI | 284036827 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.909317 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAATAC ACAAACTATC GCTGCTAATT CTGATGGGTC TGGCGGTTTT GAGTTTCATG
CCAGCCAAAA CAATTGGCGT ATTTAAGGAA AGTGTGGATG TTGGTAAACC AAAACTGACC
GGATCTGCGC AGTACGATAA AAAGACAAAG GAATACCGGC TAAAAGGTTC TGGTTATAAC
ATCTGGTTCG AACGGGATGA GTTTCAGTAC CTGTTCAAAA AAATCAGTGG TGATTTCACG
GTAACCGCTG ATTTCGAGTT TGTGGGAACT GGTACGGACC CGCACCGCAA AGTAGGCTGG
ATGATTCGGG AGTCGCTCGA CGATAATGCC TCGCACATCA GCGCTGTCGC GCATGGTGAT
GGATTAACAG TATTGCAGTG GCGGGTGAAA AAAGGAATGG CCATGCGCGA TCCCGAAGAT
GAAATCTTCA GCCAGGAGAA GCAGACATAT ACCATTCAGG TCGAACGGAA AGGCAATGAA
TATACCATGC GCGTGGCGCC GAAAGGAGGT ACCCTACAAA CGGTCGGGTC ACATACTATG
GAGAACCTGA CCGGGCCTCT CCTTGTCGGT TTGTACATCT GTTCCCATAA CCCCGAAAAA
GTAGAAGAAG CCATCGTTCG AAACGTACAG ATCGTACAAG GTAAGTAG
|
|---|
| Protein sequence | MRIHKLSLLI LMGLAVLSFM PAKTIGVFKE SVDVGKPKLT GSAQYDKKTK EYRLKGSGYN
IWFERDEFQY LFKKISGDFT VTADFEFVGT GTDPHRKVGW MIRESLDDNA SHISAVAHGD
GLTVLQWRVK KGMAMRDPED EIFSQEKQTY TIQVERKGNE YTMRVAPKGG TLQTVGSHTM
ENLTGPLLVG LYICSHNPEK VEEAIVRNVQ IVQGK
|
|---|
| |