| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1907 |
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| Symbol | |
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| ID | 8725644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 2306625 |
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| End bp | 2308817 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | |
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| Product | glycoside hydrolase clan GH-D |
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| Protein accession | YP_003386751 |
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| Protein GI | 284036821 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.506598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.205368 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAGC TTTGCCTGTC GGTACTTTTT GTTTTTTTCA TAACCTTAAT TACAAAAGCC
GCGCCGGGCG ATGTGCACAT TGCCATTGAA ACCCGGCAAA CGGCTCTGGT AATTCGGGTC
GATAAAGACC AGAGCCCAAC GTTGGTCCAT CTGGGATCAA AACTTCGAAA CGCGGCCGAA
TACGCAGCCA TTCCGGCTCG TGGCAAACGG GGTGAAGATT ATACCGATAT CTACAATTCA
GTCTATACGC CCGCTGGAAG CCGTAACTTG CTGGAGCCTG CTATTCAGGT TACCCATGCC
GATGGAAACC CTTCCCTCGA CCTGAAATAC ATTAGGCATG AAAGCCAGTC GATGGCCGAT
GGCGTTGTGC TAACGAAAGT GTACCTGAAA GACCCACAGT ACCCTTTTGA GGTTACACTG
TACTACAAAG CCTACCAGAA TGAAGATGTT ATCGAGCAGT GGAGCACCAT TCGCCATACC
GAAAAGAAGT CGATAACGCT CCATAAATAT GCTTCAGCGA ACCTATATAT CCCGGCCCAG
AACTATTACC TGACGCATTT TCACGGCGAC TGGGCCAATG AGATGAACCC CAGTGAAATA
CCGCTTACTG AAGGTATCAA GATATTGGAT TCTAAACTAG GAACCCGCGC CGACCTGTTT
CAGCCGCCCT CATTTCTGGT ATCGCTGAAT AAACCCGCTG AAGAAGAGCA AGGCGAAGTC
ATTGCCGGTA CACTTTCCTG GTCGGGGAAT TATCAACTGG CATTTGAGGT CGACCCGTTG
CATAACCTCC GGATCATACC GGGCATTAAT CCGTATGCAT CAGCGTACTC GCTGGCGCCC
GGAACCGAGT TCACGACACC CGCTTTCCTG TTTACGTACT CCGACAAAGG TAAAGGCGGG
GCAAGCCGCA GCTTGCATCG ATGGGCGCGT AAACACCGCA TTCCGCAAGG CGAAGGCAAC
CGCCTGACGC TGCTGAACAA CTGGGAAGCT ACTTATTTTG ACTTTAACGA AGAGAAATTA
AGTGCCCTGT TCAAGGATGG CAAAAAACTC GGTGTTGACC TGTTTCTGCT GGATGACGGC
TGGTTCGGGA ATAAGTACCC GCGAAACAAC GACCGGGCCG GGTTAGGCGA TTGGCAGGAA
AATGTCAAAA AACTACCGCA TGGCCTGGGC TATCTGGTTA AGGAGGCCGA AAATGCAGGT
ATCAAATTTG GTATCTGGCT CGAACCGGAG ATGGTGAGCC CCAAAAGTGA ACTGTATGAA
AAACACCCCG ACTGGGTGAT CAAACTAGCC AATCGGTCGG AGTATTACTT CCGCAATCAA
TTGGTCCTTG ATTTATCGAA TCCGAAAGTT CAGGATTTTG TCTATGGAGT CGTGAATGAC
CTAATGACCA AAAATCCGAC GCTGGGATTC ATTAAGTGGG ATTGTAATGC CGTGATCTAT
AACGCGTTCT CGGCCACCAT TCAGAACCAG TCGAACCTTT ATGTCGATTA CGTGCAAGGC
CTTTATAAAG TACTTGACCG ACTACGGGCG AAGTATCCTA CCCTGCCCAT GATGCTTTGC
TCGGGTGGTG GCGGCCGGGT AGATTATGGC GCGCTGAAGT ACTTCACCGA ATACTGGCCG
AGCGACAACA CCGACGCCCA GGAACGGATA TTTATCCAGT GGAATTACTC GTATTTCTTC
CCATCCATTG CCAGTTGCAA CCACGTGACA GATTGGGGGA AACAGCCCAT AAAGTTCCGC
ACGGACGTAG CCATGATGGG CAAGCTGGGG TACGATATTG TGGTGAGTAA ACTGACTGAA
GAAGAATTGA CATTCAGCCA GCAGGCCCTG AAGACCTACG AGGGCATTAA AAACATAATC
TGGAAAGGCG ACTTGTACCG GCTCGCTTCG CCCTACACGA ATGATGTCGC TTCTTCCATG
TACGTTAGCG AGTCGCGCGA CCGGGCGGTC TGGTTCACCT ATTTAGTCAA TTCACGCTAC
AAAGCGGGGA GTCAGGCACC CATCAAACTG AATGGCCTCG ATCCTGCCAA AAACTACCGC
ATTCGGGAAT TGAACGTTTA TCCGGGAACT ACCTCCCGAA TCAATACCAG TACAACAACG
TACTCCGGGA ACTACCTGAT GGCCATTGGC TTCAATCCGC AGGTAGACAC CCGCCGAACC
AGCGTGGTGC TGGAGGTGAA CGAAGTAAAA TAA
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| Protein sequence | MKQLCLSVLF VFFITLITKA APGDVHIAIE TRQTALVIRV DKDQSPTLVH LGSKLRNAAE
YAAIPARGKR GEDYTDIYNS VYTPAGSRNL LEPAIQVTHA DGNPSLDLKY IRHESQSMAD
GVVLTKVYLK DPQYPFEVTL YYKAYQNEDV IEQWSTIRHT EKKSITLHKY ASANLYIPAQ
NYYLTHFHGD WANEMNPSEI PLTEGIKILD SKLGTRADLF QPPSFLVSLN KPAEEEQGEV
IAGTLSWSGN YQLAFEVDPL HNLRIIPGIN PYASAYSLAP GTEFTTPAFL FTYSDKGKGG
ASRSLHRWAR KHRIPQGEGN RLTLLNNWEA TYFDFNEEKL SALFKDGKKL GVDLFLLDDG
WFGNKYPRNN DRAGLGDWQE NVKKLPHGLG YLVKEAENAG IKFGIWLEPE MVSPKSELYE
KHPDWVIKLA NRSEYYFRNQ LVLDLSNPKV QDFVYGVVND LMTKNPTLGF IKWDCNAVIY
NAFSATIQNQ SNLYVDYVQG LYKVLDRLRA KYPTLPMMLC SGGGGRVDYG ALKYFTEYWP
SDNTDAQERI FIQWNYSYFF PSIASCNHVT DWGKQPIKFR TDVAMMGKLG YDIVVSKLTE
EELTFSQQAL KTYEGIKNII WKGDLYRLAS PYTNDVASSM YVSESRDRAV WFTYLVNSRY
KAGSQAPIKL NGLDPAKNYR IRELNVYPGT TSRINTSTTT YSGNYLMAIG FNPQVDTRRT
SVVLEVNEVK
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