Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1887 |
Symbol | |
ID | 8725624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 2281358 |
End bp | 2282434 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | Kelch repeat-containing protein |
Protein accession | YP_003386731 |
Protein GI | 284036801 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.445604 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCATT TACCATTCCG ATTTCATTCG GCTACCGACT CCCAGCCGCA ATCTGTACCC CAAGAGGCTC TGCTCTCTCC CGTAACGAAG ACAGGTAAAA AACAGCAACG GATAAATTGG GTGCTGGGTG CTCTTTCTAT CGGCTGGGCA GGACTGCTGA TCGGCTGTAG CAGTTCCACC ACGGTGTCGA CCCTGGGTGA CTGGACAAAA AGATCCGCAT TTGAAGGCGT GGGCCGTTCA GGTGCATCTA GTTTTGTCAT TAACAATATT GCTTACCTGG GTACCGGCCT TGATGCCAGT AACCAGCGGC TTCAGGATTT CTGGGCTTAT GACCCGGCCA AAAATGCCTG GACACAAAAA GCCAACTATG GTGGTGTAGC CCGCTACTCA GGCGTAGGCT TTGCTGTCGG CAACAAAGGG TATATCGGTA CCGGTATCAA TGTCAACAGC GACAAGCTGA AGGATTTCTG GAGCTACGAT CCAACCACCA ACATATGGAC CAAGGTTTCG GATTTCGGCG GAACAGCCCG GTACGGTTCG CTGGCTTTCG GAATTGGCAA CAAAGGCTAT GTGGCCACCG GCAACGACGG TAACTACCTC AAAGATATGT GGGCGTTTGA CCCTACGGCC AATGCCTGGA CCAAGGTAGC TAGCTACGGT GGTGAAAAAC GCATTGGCGG TATCGCTTTT GTGATTGATG GCAAAGCCTA TGCAGGTACC GGAAACAACA ATGGTATTGC CCAGCGGGAC TGGTATGTGT ATGATCCGGC CACGGATGTA TGGACGCAGA AGCTCGACTT CCTGACCGAT CAGGCCGTTC AGCGCAGCTA TGCTGTTGGG TTCGCCATCA ATGGCAAAGG TTATGTGACA CTTGGCGATA ACGTATCCGT TTGGCAGTAC AATCCGGCCG ATGATACCTG GTCGCAACTT GGTTCTTTTG AAGGATCTCC CCGCCAGAAC GCGGTAGGCT TTGCAATCGG AAACAAAGGG TACGTTACCA CGGGTAGTTC CAGCGGAACA AGCCGTTTTG ACGATCTGTG GGATTTCGAT CCAGCCGTTG AGCAGGTTAT TAACTAA
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Protein sequence | MIHLPFRFHS ATDSQPQSVP QEALLSPVTK TGKKQQRINW VLGALSIGWA GLLIGCSSST TVSTLGDWTK RSAFEGVGRS GASSFVINNI AYLGTGLDAS NQRLQDFWAY DPAKNAWTQK ANYGGVARYS GVGFAVGNKG YIGTGINVNS DKLKDFWSYD PTTNIWTKVS DFGGTARYGS LAFGIGNKGY VATGNDGNYL KDMWAFDPTA NAWTKVASYG GEKRIGGIAF VIDGKAYAGT GNNNGIAQRD WYVYDPATDV WTQKLDFLTD QAVQRSYAVG FAINGKGYVT LGDNVSVWQY NPADDTWSQL GSFEGSPRQN AVGFAIGNKG YVTTGSSSGT SRFDDLWDFD PAVEQVIN
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