Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1881 |
Symbol | |
ID | 8725618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 2275479 |
End bp | 2276786 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_003386725 |
Protein GI | 284036795 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.652277 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGGGG CCAAACCATA TGAACAGTTG CTGGCTGAAA ATGAAAATCT ACGCTGGCAA CTTTACGAAG CAACCGAAAC AATTCAGGCC ATCCGAACCG GTCAGATTGA CGCACTTGTT GTTCAGGGAA CGGAAGGGCA CGAACTCTAT ACACTTAAAA CGGCAGACCA TACATACCGG ATCTTCATCG AAACCATGAA TGAAGGGGCC GTAACCCTAA ACCGGGAAGG GTTTATCCTG TATAGTAATT CAGCCTTTGC CACTATGGTT GAGTTACCGT TGACAAAAGT ATTTGGCTTA CGATTCAGAG AGTTTGTGTC ACCCGATATG CAGTCGGCAT TCGACCTTCT CTTCAACGAA AGCTGGTTAG GGAATAAGAA AGAGGAGCTA TCCATTAAAA GTATCAACCA CACGATCGTA CCGTGTCTTT TATCGGTAAC CCCCATGCAG TTGGACGGCG GAGACTGTCT AAGCCTGATT CTTACGGATT TAACAGCGCA GAAAGAAACC CAAAAGCTGT TAAAGATAAA AAATGAAGAA CTGGCCCAAA CGAACACTGC CCTCGAAATC AGCAATCAGG CGCTGAACCG CTCCAACAGT AACCTTCAGC AATTTGCTTA CGTTGCCAGT CACGATTTGC AGGAACCTCT CCGCAAAGTT CAGCAGTTTG GCGACCTCCT CAAAAACAGA TACGCCGGGC AGTTGGGCGA TGGGGTTAAC TACCTAGAAC GGATGCAGTC AGCAGCGAGC CGTATGTCGA CGCTGATTCG CGATCTGCTG AGTTTCTCCC GCATTTCTAC CCAACAGGAT ACCATTGCAC CCGTTTCGCT GTCGGCCGTC TTTAAAAATG TGCTGACCGA TTTAGATCTG CGCATTCAGG AAACCAATGC GATGATCACC TTAAGTCCGC TGCCTGACAT CCAGGGTGAC CAGTCACAGC TGGAGCAATT GTTTCAGAAC CTGGTGAGTA ATGCGCTGAA ATTCCGCCGT CCCGGCGAAC GTCCTGTTAT TCATGTAAGC TCGAAGCTGC TACCCACCGA AGACTTACCA GCGTTCGTTA AGCCGACCCG ACAGACAGCC GCTTACCATC GCATCGACGT AAGCGATAAT GGTATTGGTT TTGATGAGAA GTACATTGAC CGGATTTTCC AGGTATTCCA GCGATTACAC GGCAAAAACG AATACGTCGG AACGGGGATT GGCCTCGCGA TCTGCGAGAA AGTAGTAGCC AATCACGGCG GTGCCATCAG CGCCAGCAGC CAGCCCGGAC AGGGAGCAAC GTTCAGCGTA TACCTGCCAA AGCCTTAA
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Protein sequence | MNGAKPYEQL LAENENLRWQ LYEATETIQA IRTGQIDALV VQGTEGHELY TLKTADHTYR IFIETMNEGA VTLNREGFIL YSNSAFATMV ELPLTKVFGL RFREFVSPDM QSAFDLLFNE SWLGNKKEEL SIKSINHTIV PCLLSVTPMQ LDGGDCLSLI LTDLTAQKET QKLLKIKNEE LAQTNTALEI SNQALNRSNS NLQQFAYVAS HDLQEPLRKV QQFGDLLKNR YAGQLGDGVN YLERMQSAAS RMSTLIRDLL SFSRISTQQD TIAPVSLSAV FKNVLTDLDL RIQETNAMIT LSPLPDIQGD QSQLEQLFQN LVSNALKFRR PGERPVIHVS SKLLPTEDLP AFVKPTRQTA AYHRIDVSDN GIGFDEKYID RIFQVFQRLH GKNEYVGTGI GLAICEKVVA NHGGAISASS QPGQGATFSV YLPKP
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