| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1879 |
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| Symbol | |
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| ID | 8725616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 2271283 |
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| End bp | 2273172 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | protein of unknown function DUF1080 |
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| Protein accession | YP_003386723 |
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| Protein GI | 284036793 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.985217 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCGCA AATTTTTAGG CGTATTGTTC GGCCTGCAGG TTTATGCGCT GAGCACGCTG
GCGCAATCGA GTGAACTGCC GTATACAACG GTAAGCCTTC AGAATCTGGC TGATTTCAAA
CCAACCGGTT CTAACTGGAA GATCGTTGGC GATGTCTTCT ACGACCTCAA CAAAGAGGGT
AAGGGGACAA CTAAATCCGG AACGGGTGTG CTGGTCAATG ATCTGTCCGG AAAGAGTAAA
GAGCAGCTCT TTACCAAACT GGAACACGGT GACCTGGAAC TTGACCTCGA CTTCATGATG
GAAAAAGGGT CCAATTCGGG CATTTATCTT CAGGGTCGGT ACGAAGTTCA GCTGTTCGAT
AGCTGGGGCG TTAAAGTGCC CAAATCGAGC GATTGCGGGG CTATTTATGA ACGCTGGGAC
GACAAACGCC CCAATGGACA GAAGGGTTAC CAGGGGCACC CGCCAACCCA GAACGTCAGC
AAGGCACCGG GGTTGTGGCA GCATTTTCAT ATCGTTTTTC GGGCTCCCCG TTTCAATCAG
GCGGGCCAGA AAATAGCCAA TGCACGCTTC CTGAAAGTGG TTATGAATGG GGTTACCGTT
CAGGAGAACA TCGAAGTGCT CGGACCAACG CGTTCGGCCG GTTTTCCGGA CGAAAAACCC
ACCGGGCCGC TCATGATTCA GGGCGATCAC GGGCCGGTGG CCTTTCGGAA TATCCGCTAC
AAAGCGTACG AAACAGAACT CGTTACGCTG TCGAACCTCA AACTAAGCGC CTACGAGGGT
AAATTCAAAT CGGTGAGCGA ATTGGCGTTA CTAACGCCGA AACGGGAAAT GGCAATTGAG
GTACTGGCGC ATCAGGCATC CGGCAGCCGC GACAATTTTG CCGGTAAGAT TGCGGGAACC
ATCCATATTC CCCGCGCTGG TGAATACGTG CTGTCGCTAC AATTGCCCTG GATTCCGGCA
GAGGTGAACA AAACGGTGCG CAACGGTGCC GGTGAGTTGA CAATTGCTGG TAAAAAGATT
CTGTCTATCG ATACGGAAGA TGGGGGTAAG ACATCGGCTA AAGTGAACAT GCAGGCGGGC
GATTTTCCGA TTGAGCTGAG CTATTACAAG AATTTCGGTT TGTGGTACGC CCGTAGCAAC
GACATTACCC TGGCGGTAGA AGGCCCCGGT GTTCCCTACA TGGCGCTCAA CCAGATGATT
CGGGCGGAGG AGCCCGTTGG CGAAATTTCA TTGCTGGCAA AAGATGAACC CGTTATGCAG
CGGGGATTCG TAAATCACCA CGGCATAAAG CATACACATA CAATTTCCGT TGGCGAACCG
GGGGCTGCCA ACTACAGCGT CGACCTTCAA AAAGGGCAGT TCCTGCAAAT CTGGCGGGGT
GATTTTCTGG AAACGACCCC CATGTGGTAC GGTCGTGGCG AAACGCAGCT GTCCGTTCCA
ATCGGCAGTG TAATCGAGCT TTCGGGCAAG CCATCACTAA CTATGCTGGC CAATCAGAAT
GCCGTTTGGC CCGACTCTAA TGCCACGTAT ACGAACCTGG GTTACGATGT CGATAAGAGT
GGTCGACCGA TTTTTAAGTA CACCCTGAGT GGCGCTTCCG TTCGGGAGTC GTTTGCCGCC
GAAGAGAATG GCCGGAAGCT GGCGCATTCG TTTACCATTA CACCGGGAGC GACCGGCAAC
GGCGACCTCT GGTGTCTGGT CGCTGAAGGG GCCGACATCC AGCAGCTGCC AAATGGCTTG
TATGCCATAA ACGATAAACA GTATTTTGTT GAACTGCCGG GAAAAGAAAA ACCGCTTATT
CGGAACACTG CCCGGAACAC CAAAGAACTG CTGCTACCCA TCAAATCGAC CAATAATGTG
GGCACGGCGA GTTACTCAAT CATCTGGTAA
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| Protein sequence | MYRKFLGVLF GLQVYALSTL AQSSELPYTT VSLQNLADFK PTGSNWKIVG DVFYDLNKEG
KGTTKSGTGV LVNDLSGKSK EQLFTKLEHG DLELDLDFMM EKGSNSGIYL QGRYEVQLFD
SWGVKVPKSS DCGAIYERWD DKRPNGQKGY QGHPPTQNVS KAPGLWQHFH IVFRAPRFNQ
AGQKIANARF LKVVMNGVTV QENIEVLGPT RSAGFPDEKP TGPLMIQGDH GPVAFRNIRY
KAYETELVTL SNLKLSAYEG KFKSVSELAL LTPKREMAIE VLAHQASGSR DNFAGKIAGT
IHIPRAGEYV LSLQLPWIPA EVNKTVRNGA GELTIAGKKI LSIDTEDGGK TSAKVNMQAG
DFPIELSYYK NFGLWYARSN DITLAVEGPG VPYMALNQMI RAEEPVGEIS LLAKDEPVMQ
RGFVNHHGIK HTHTISVGEP GAANYSVDLQ KGQFLQIWRG DFLETTPMWY GRGETQLSVP
IGSVIELSGK PSLTMLANQN AVWPDSNATY TNLGYDVDKS GRPIFKYTLS GASVRESFAA
EENGRKLAHS FTITPGATGN GDLWCLVAEG ADIQQLPNGL YAINDKQYFV ELPGKEKPLI
RNTARNTKEL LLPIKSTNNV GTASYSIIW
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