| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1835 |
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| Symbol | |
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| ID | 8725572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 2216038 |
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| End bp | 2218887 |
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| Gene Length | 2850 bp |
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| Protein Length | 949 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | peptidase M16 domain protein |
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| Protein accession | YP_003386679 |
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| Protein GI | 284036749 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.300051 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.619696 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACA CGCCTACCCA AACGGGTTGG TTCCCCTCTG TGCGGTACCA CCTGCAACTG
CTCACCGCTA CGCTGCTTCT GGGCAGCACA ACCCTCACGA ATGCACAAAC AGCCTCCACG
TCGGCGAAAC TTCCCGAAGG CATCACCAAA ACGGCTTCGG TCGAAGGCAT TACCGAGTAT
CAACTCAAGA ACGGCCTGCG TGTCCTGCTT TTCCCGGACC CATCCAAGCC CACCGTTACC
GTAAACATCA CCTATCTGGT CGGCTCCCGG CACGAAGGCT TGGGCGAAAC CGGTATGGCG
CACTTGCTGG AACACATGGT ATTCAAGGGT TCGCCAAAGC ACAAAAACAT TATGCAGGAG
CTAACCGAAC ACGGCACCTG GCCCAACGGC ACGACCTGGT ACGACCGCAC TAACTATTTC
GAAACCTTTT CGGCCACCGA CGAGAATCTG AAATGGGCGC TCGACCTCGA ATCGGATCGG
ATGGTGAATA GTTTCATCGA CAAAAAAGAC CTCGAAACGG AGTTTACCGT CGTTCGGAAT
GAATTTGAAA TTGGCGAAAA CTCGCCCCAA TGGACGCTCG AAAAGCGGGT AATGTCGGCG
GCTTACCTCT GGCATAATTA TGGCAAATCG ACCATTGGCT CAAAAGAAGA TATTGAGCGG
GTGCCCATCG AAAGTCTCAA AGCTTTTTAT CAGAAATATT ACCAGCCCGA TAATGCCGTA
TTGCTGGTAG CGGGTAAGTT CGACGAAGCC AAAACCCTCG ATCTCGTGAG TCAGTATTTT
GGCCCCATTG CCCGTCCTAC CCGCCAGTTA GTTAAACCGT ACACGGTAGA GCCTACTCAG
GACGGCGAAC GCCAGACAAC CCTCCGGCGC GTGGGCGACA CACAGGGCGT AGCAGCCGCT
TACCATACGC CCGCCGGATC ACACCCCGAC TACGCAGTGA TGGATGTGCT AATGGACGTG
CTCACCAACG AACCATCCGG GCGACTGTAT AAGGCGCTTA TCGAGAATAA GAAAGCGGCC
TTTCAATACG GCTGGACACC CGCTCTGCAC GACCCCGGCT TCGCTTATTT TTACGCTGAA
CTTCGAAAAG ATCAGTCTCT CGACTCCGCC CGGACGGTTA TGCTGGCTAC GCTCGATGAG
GTAAGCAAAA AAGCACCAAC GGCCGAAGAA GTTGATCGGG CGAAAACCAA ACTGCTGAAG
GACATCGACT TGCTCTTCAA GAACACCGAC CGCCTGGGTC TGCAACTGAG CGAATGGATT
GCTACGGGCG ACTGGCGACT GGTTTTCCTG TACCGCGATG CCCTCCGTAA GGTACAACCA
GCCGACGTTC AACGGGTAGC AGCCGCCTAC TTCAAACCAT CGAACCGGAC GGTAGGCGTG
TTTATTCCCG AACAGAAACC CGACCGCGCC GAGGTGCCCG AGGCCCCCAA CGTAGCGGCT
CTGGTAAAAG ACTATAAAGG AGAAGCCGCA GTTGCATCGG GAGAAGCCTT CGACGTATCG
CCAGCTAACA TCGACGCCCG TACCAAACGC GGATCGGAAG CCAACGGGCT GAAATATGCC
TTATTGCCAA AAAGTACACG CGGCAATTCG GTGAACATGC AAATACGCCT TCGCTACGGC
GATGAAAAAA GTCTGACAAA TCAATCGACT GCGGCCCGTT TTACGGCTCA AATGCTGGAA
CGAGGTACGA AAACACGCTC CTATCAGCAA ATTAAAGATC AGTTGGATAA ACTAAACGCA
CGGGCGTATG TCTATGGCTC CGGCCAGTCG GCCACGGTAC AGATCGAAGC CGAAAAAGAT
AAATTAGCCG CCGTGATGAA GATTGTTACG GATTTCCTGA AGAACCCGAC CTTCCCCCAG
GCGGAACTGG ACAAGGTAAA ACAGGAAGCG CTGGCGCAGG TTGAGTCACA GAAACAGGAA
CCACAAGCCA TTGCCTGGAA AACCCTGAGT CGCTTGACCG AGCCGTACCC CAAAGGGCAT
CCGTTCTACA CCATGACGTT CGACGAGGAA ATCGACGCTA TCAATAAAGT AACGCTGGCC
GATATAACCG CTTTCTACAA AAACTTTTAT GGAGCCAACA ACGCGACGGT AGCCGTTGTT
GGGGCGTTTG ACGAAGCAGC CGTGCGGAAG CTTATCAAAG ACGACCTGGG TAGCTGGAAA
TCGGCCAAAC CCTTCACGCG CATACCACAA ACACTCTTTG CCGACCTGAA GCCCCAGACG
CAAACCATTC AGACGAACGA CAAAACGAGT GCCGTTTTTG CGGGCGGTCT GCAGTTTGCC
CTTCGCGACG ATGACCCCGA ATATCCGGCT ATGGCCATGG CCAATTACAT TTTGGGCGAA
GGCATGCTCA ACTCGCGGCT GGCTACGCGT ATACGGGTAA AAGACGGCCT CAGCTACGGC
GTTGGTTCGT ACGTATATGC TGATGACAAC GACCGTGTTG GCAACTTCGG ATCCTATGCA
ATCTATAATC CGGAGAACGG CGAAAAATTT GATAACGCCT TTCGGGAAGA GGTTCAGAAG
CTCGTAAAGG ATGGCGTCAC TGCCGATGAA GTTAGAGCCG CTAAATCGGC CATGCTTCAG
GAAAGACAGC TGGATCGTTC GCAGGATGGG TCGCTTGCCA GAAAGTGGGC ACAGTACCTG
ACACGAAATG AAGGCCGTAC TTTTGCCTAC GATGCCAGTT TCGACAAGAA ACTCGAAGCC
CTGACGCCCG AACAGATCAA TGCCGCGCTG AAAAAATACC TCGACTATGC GAAGCTTACG
ATGGTAAAAG CGGGAGATTT TGAGAAAGCC GCGAAAAAAG TTGCGGATAA GCAGCCAGCC
TCGTCGGTGA GTGGTGGAGC GAAAAACTAA
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| Protein sequence | MKNTPTQTGW FPSVRYHLQL LTATLLLGST TLTNAQTAST SAKLPEGITK TASVEGITEY
QLKNGLRVLL FPDPSKPTVT VNITYLVGSR HEGLGETGMA HLLEHMVFKG SPKHKNIMQE
LTEHGTWPNG TTWYDRTNYF ETFSATDENL KWALDLESDR MVNSFIDKKD LETEFTVVRN
EFEIGENSPQ WTLEKRVMSA AYLWHNYGKS TIGSKEDIER VPIESLKAFY QKYYQPDNAV
LLVAGKFDEA KTLDLVSQYF GPIARPTRQL VKPYTVEPTQ DGERQTTLRR VGDTQGVAAA
YHTPAGSHPD YAVMDVLMDV LTNEPSGRLY KALIENKKAA FQYGWTPALH DPGFAYFYAE
LRKDQSLDSA RTVMLATLDE VSKKAPTAEE VDRAKTKLLK DIDLLFKNTD RLGLQLSEWI
ATGDWRLVFL YRDALRKVQP ADVQRVAAAY FKPSNRTVGV FIPEQKPDRA EVPEAPNVAA
LVKDYKGEAA VASGEAFDVS PANIDARTKR GSEANGLKYA LLPKSTRGNS VNMQIRLRYG
DEKSLTNQST AARFTAQMLE RGTKTRSYQQ IKDQLDKLNA RAYVYGSGQS ATVQIEAEKD
KLAAVMKIVT DFLKNPTFPQ AELDKVKQEA LAQVESQKQE PQAIAWKTLS RLTEPYPKGH
PFYTMTFDEE IDAINKVTLA DITAFYKNFY GANNATVAVV GAFDEAAVRK LIKDDLGSWK
SAKPFTRIPQ TLFADLKPQT QTIQTNDKTS AVFAGGLQFA LRDDDPEYPA MAMANYILGE
GMLNSRLATR IRVKDGLSYG VGSYVYADDN DRVGNFGSYA IYNPENGEKF DNAFREEVQK
LVKDGVTADE VRAAKSAMLQ ERQLDRSQDG SLARKWAQYL TRNEGRTFAY DASFDKKLEA
LTPEQINAAL KKYLDYAKLT MVKAGDFEKA AKKVADKQPA SSVSGGAKN
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