| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1815 |
|---|
| Symbol | |
|---|
| ID | 8725552 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 2191323 |
|---|
| End bp | 2192549 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | beta-lactamase |
|---|
| Protein accession | YP_003386659 |
|---|
| Protein GI | 284036729 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.270787 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCATCGA AGTTAATTTT CCTGTTTTTT CTGGTAAGTA CCATCGTTGT TGCCCAAAAG
AAAGTTACTC CCAAAGCCAG CCCGTATTTT CCGGCCGCCC ACCAATGGCT TCGCAAAACC
CCCGCCGAAA TGGGATTATC GGCAGGCAAA ATTCAGGAAG CTATTGCGTT TCATCGGGAG
AATGAAATAA AGAATCCCCG CAGCATGGAG CAGTCGCATT ACCAGTCGTT TGGCAAAGAA
CCGTTTGGGT ATGCCGTCGG GCCTTTTGCC GACCGGGGCG AACCGACGGG GGTTATCGTC
TACAAAGGCT ACATTGTGGC TGAATGGGGC GAACCGCAGC GCTGCGACAT TACGCATAGC
GTGACCAAAA GCTTTCTGTC GACCGTTGTT GGCTTGGCAG TCGATAAAGG ACTGATTCGG
AGCGTAAACG ATACCGTTGC TGGCTATGTG CCGCCCATTG AGTTGTACAA TCAACCCGTT
ACACGTCCCG CCGACGAGTT TGGCAAACCC GAACTAATCA CCCCCTTCCA AACCCCGCAT
AACCGCACCA TCACCTGGGA CCACATGCTG CGCCAAACCA GCGATTGGGA GGGAACCCTT
TGGGGTAAGC CCGACTGGGC CGACCGTCCT GACCCGGATG CCGCCAAATG GCTGAACCGC
AAACGCAATC AGCCCGGTGC CGTCTATGAA TACAACGATG TTCGGGTAAA TGCCCTGGCC
CTGGCCGCGA CCAGCGTCTG GCGCAAACCC CTTCCGCAGG TGCTCAAGGA AAACGTAATG
GATGCCATCG GCGCATCGAA CACCTGGCGC TGGGCGGGCT ACCGGAATTC GTGGATCGTG
CTGGATGGTC AGGCCGTGCA ATCGGTGAGT GGAGGTGGCC ACTGGGGCGG GGGTATGTTC
ATCAACGCGC TCGATATGGC CCGTTTCGGC TTGCTGACGC TGAATAAAGG GAATTGGAAC
GGACAGCAGT TGATTTCTGA ACAATGGATC AACCAGTCGA GAACACCAAC CCCCGCCCAG
CCTACGTATG GTTACATGAA CTACTTCCTG AATACCGATA AAAAGTTGCT GCCATCGGCA
TCGGCCAGTA GCTATTACCA TCTGGGTAAT GGCACTAACA TGATTTATGT CGATACGGAA
CACGATCTGG TAATGGTCGT TCGCTGGATT GACACAAAAG CGATGGACGG TATTGTAAAA
CGGGTACTGG ATGCATTTCA GAAGTAG
|
|---|
| Protein sequence | MPSKLIFLFF LVSTIVVAQK KVTPKASPYF PAAHQWLRKT PAEMGLSAGK IQEAIAFHRE
NEIKNPRSME QSHYQSFGKE PFGYAVGPFA DRGEPTGVIV YKGYIVAEWG EPQRCDITHS
VTKSFLSTVV GLAVDKGLIR SVNDTVAGYV PPIELYNQPV TRPADEFGKP ELITPFQTPH
NRTITWDHML RQTSDWEGTL WGKPDWADRP DPDAAKWLNR KRNQPGAVYE YNDVRVNALA
LAATSVWRKP LPQVLKENVM DAIGASNTWR WAGYRNSWIV LDGQAVQSVS GGGHWGGGMF
INALDMARFG LLTLNKGNWN GQQLISEQWI NQSRTPTPAQ PTYGYMNYFL NTDKKLLPSA
SASSYYHLGN GTNMIYVDTE HDLVMVVRWI DTKAMDGIVK RVLDAFQK
|
|---|
| |