Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1797 |
Symbol | |
ID | 8725534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 2169577 |
End bp | 2172939 |
Gene Length | 3363 bp |
Protein Length | 1120 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | Exodeoxyribonuclease V |
Protein accession | YP_003386641 |
Protein GI | 284036711 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00119316 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.701381 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAAAA TATACAGTTC TTCGGCTGGG TCGGGGAAAA CTTATACGCT GACGAAAGAG TACCTGAAGC TGGCGTTGCG GCCGGGTGAA AAGGACGACT ATTTTCGCCG GATTCTGGCC GTGACGTTCA CCAACGCGGC TGCCAACGAG ATGAAGAACC GGATTCTGAA AAACCTGTCG GAGATGGCAG GTAAAAAAGA ATCCCCTCTG CTCAATGAAC TGGTTACGGA ACTGTACGAC ACCCCGCCGG GTAGCGATTT GTTTGAGGAC AAGAAAACTG AACTGTGCAG CCGGGCCTCG TCTGTTTTCA GAACAATTCT GCACCGCTAT GCCGATTTCA GCGTAACCAC CATTGATTCC TTCACACAGC GGGTGGTGAT GGCCTTTACG GATGAGTTAG GATTGCCCTA TTCGTTCGAT GTCGAAATGG ACACCGACGA AGTGCTGGAA CTGGCCATCG ACAACCTCAT TGAGAAGGCC GGTACCGATG AGATGGAAGA AATTACGACC ATCCTGAGCG AGTACTACAC CCACACGGCC GCTGAAGGCA AAAGCTGGAA CCAACTGCCA GAATTGCTGA AAGAATTTGG CCGAAACCTC ACCTCCGATC AGTTTTACGA AGCCGTCAAT GCGGCCCAGA AATTATCGCC GGGGGCGTTG CGTGCCATTC GGGCTCAGTT ACTGAACCAT AACCAGCAGA TTGAAACGGA CATTATCGGG CAGGGGCAAC GCGCCTGGAA ACTGATTACT GATGCGGGGC TGGATGAAAA AGATTTCAGT TACGGAGCCA GCGGTGTAGG GGGCTTTTTA AAAGCAATTG CCGAAGGAAA CGCGCACAAA GATGCCGGTA CGCGCGTCAG CAACGCGTTA ACGAATAATG AGTGGTACAC CAAAAAGACA CCCCTTCCCG TGCAGGCCAT GATCGACAAT ATGGCCGCAG AACTAGGTGC GTGTATCTCA GAAATACTTC GTATTCGGGA GGAGAGTAAC CATCAGGTAA CCCTGTTCGA TTGCCTGCTG CCCCATTTGC AGAAACTGGC TTTGCTGAAG CAAATGCGCC TGGAGTTCGA TGATCTGCTG CGAAAAGACG GCCGGGTGCA CATCTCCGAA TTCAATAAAA AGATTCTGAA CATTGTGGCG TCGGAACCGG TGCCGTTCCT CTACGAACGA CTAGGTACGA AATACAACCA CATCCTGATT GATGAGTTTC AGGATACGTC GCGGCTGCAA TTTGCCAACC TGTTGCCGCT CATCGAGAAC TCCCTGGGTG CCGACCATTT CAATCTGGCC GTGGGCGACG GGAAACAGGC CATTTACCGC TTCCGGGGGG GCGATATGGA CCAGATCGTT GCCCTGCACC GCAAAGACCT CGACAGCCTG AAACAGGCGC ATAACCCCGG TTCGTGGACC GCCGACCGCA TCGATATGCT CGATGGGCAT CTGAAAGACG AATTGCTCGA TACCAACTGG CGAAGTGCCG AACCCATCGT TCGCTTCAAC AACGATTTTT TTGAGTTCAC CGCCCGCAAG TTTGAAAGCC AGCACCCGAA ACTGACCGAT GTATTCGACA GTCAGAAGTT GTTTCACCAG AAAGCGCAGC CTAAGGCTAA CCTAGCCGGG CATGTGCAGA TCGACTTCGT TGCCAAAGAC GATGCGACGG ATAAAGACCT GACCGCTCAG ATGCTCGAAA AAGCGATGGA GCACCTGAAT AAAGCCCTGA ACGACGGGTA TAAATACGGT GACATCGCTA TCCTGTGTCG AAAAAAATCC CACGCAAAAG CACTCGCCAA CGAGCTAAAT GCCCGACGGA TACCGCTCGT GTCGGCCGAT TCGCTGTCGC TGGAGTTTTC CGATCCGGTC AAGTGGCTGG TAACGCTCAT GCAGCTGCTG CAGCGGCCCG ACCAGAAACT GCTTCGTTAC GAATTGCTGT ATCTGTTTCA TCGGGTAGTG CAGGATATTT TTCCGGACAA TACCCTCACC ACCAAACTTC GATCCGTTGC GGAGAGCGAT ATCGACGCCC TCTACGCTTA CCTGGCCGAA GAAGGTTACC CCCTCGACCC GTATGCGCTC GGGCAACTCA ATCCGTACGA GCTGGCCGAG CGATTGACCG CTCAATTCGG TCTGTTCAAT CAGGCGGAGC ATAACCCGTT CCTCTTTCGG TTCCTCGACG AAGTACTGGC GTTTAATCAG AAGCGGAGCG GTCACCTGAG CGACTTTCTC TTGTATTGGG AAGGCGTTCG GCAGAAGATT TCGGTTGAGG GCAACGCCCG CAATGCGGTG AGTATACAAA CCGTTCACAA ATCGAAAGGA CTTGAGTTCC CGGTGGTGAT CATTCCCTTC GCCAACTGGC GGGTGGAGCC CATTAACGAC AGCACCATCT GGCTCGATCT GAGCAGTATT CGGAGCGATA TGCTGACGCA CGAAAATAGC ACCGGGGAAC TGACCCGACT ACTATCGGCA CCTGCCAATA CGACCAGTAA ACTGCGGGGT GCTCCGGCTG TAGTAGCGGC TCAGTACGAA GAGGAGCTGA CGCGGACGTT TCTGGAAAAT ATGAATATGC TCTACGTGGC TTTCACCCGC CCAACGGATC GGTTGTACGT CATTAGTGAA GCAAAGGATT TCAGCAAAGG CCAGCAAAAC ACCATCAGCC ATTGGTTGCA TGCGTTTCTG CGCGATAGCG AGGTGGCCCG TAATTGCGGC TGTGCCTGGC AGGAAGGCGT ATTTAGTTAC CAGATCAGCC TTTGCGCCGA ATATTTCCCG CATCACAAAG CTGATGAGTC CCTGGATGAA ATCGTGCTGG ACGAAATCGT GAGCGGGCAT CGGGGGCAGG ACTTACAACT TCGCCGTCAG GCCGACAGGA TGTTCGATGT TGCCACGTTT GAGCGCACCC GCGAACGTGA TCGTAAGCTT TGCGCGGCCC TCAGTCTGAT CAGGGGTTCC GAAAGCATCG ACAAAGTACT TCGTCAACTC GTTAGCGAGG GGCTTGTCCG GCAGGTAGAA TGTGACGAAT TAAAGCAAAG TCTGCTGGGC ATTGTTTCGC ATCCGGCTTT ATCAGCCCTG TTCGATTCTA CCTTGCGGAT CGATACAGAT CGAAGTATCC TGAGTAATAA GCGGGTACAC GGTGCCCCGC ACCGGGTGGT GCATTTTCCG GATGGGCACA TCGTGCTGGT GCAATATGAG TCGAAAGCCC TTTCGCCGGA AGCAGAGGCT GTACCTGCAT TGGAACCAGA ATCGGCAAAA ACGTACTCGC CAACGGACAC CCTGAAGTAC TTTACTCGTT TGTACCGGGA TATGGGGTTT GCGGAAGTGG AAGGCCGGTT GGTGTATCTG GCTGACGAGC CCGATGTAGT TAATGTAGTG TAA
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Protein sequence | MFKIYSSSAG SGKTYTLTKE YLKLALRPGE KDDYFRRILA VTFTNAAANE MKNRILKNLS EMAGKKESPL LNELVTELYD TPPGSDLFED KKTELCSRAS SVFRTILHRY ADFSVTTIDS FTQRVVMAFT DELGLPYSFD VEMDTDEVLE LAIDNLIEKA GTDEMEEITT ILSEYYTHTA AEGKSWNQLP ELLKEFGRNL TSDQFYEAVN AAQKLSPGAL RAIRAQLLNH NQQIETDIIG QGQRAWKLIT DAGLDEKDFS YGASGVGGFL KAIAEGNAHK DAGTRVSNAL TNNEWYTKKT PLPVQAMIDN MAAELGACIS EILRIREESN HQVTLFDCLL PHLQKLALLK QMRLEFDDLL RKDGRVHISE FNKKILNIVA SEPVPFLYER LGTKYNHILI DEFQDTSRLQ FANLLPLIEN SLGADHFNLA VGDGKQAIYR FRGGDMDQIV ALHRKDLDSL KQAHNPGSWT ADRIDMLDGH LKDELLDTNW RSAEPIVRFN NDFFEFTARK FESQHPKLTD VFDSQKLFHQ KAQPKANLAG HVQIDFVAKD DATDKDLTAQ MLEKAMEHLN KALNDGYKYG DIAILCRKKS HAKALANELN ARRIPLVSAD SLSLEFSDPV KWLVTLMQLL QRPDQKLLRY ELLYLFHRVV QDIFPDNTLT TKLRSVAESD IDALYAYLAE EGYPLDPYAL GQLNPYELAE RLTAQFGLFN QAEHNPFLFR FLDEVLAFNQ KRSGHLSDFL LYWEGVRQKI SVEGNARNAV SIQTVHKSKG LEFPVVIIPF ANWRVEPIND STIWLDLSSI RSDMLTHENS TGELTRLLSA PANTTSKLRG APAVVAAQYE EELTRTFLEN MNMLYVAFTR PTDRLYVISE AKDFSKGQQN TISHWLHAFL RDSEVARNCG CAWQEGVFSY QISLCAEYFP HHKADESLDE IVLDEIVSGH RGQDLQLRRQ ADRMFDVATF ERTRERDRKL CAALSLIRGS ESIDKVLRQL VSEGLVRQVE CDELKQSLLG IVSHPALSAL FDSTLRIDTD RSILSNKRVH GAPHRVVHFP DGHIVLVQYE SKALSPEAEA VPALEPESAK TYSPTDTLKY FTRLYRDMGF AEVEGRLVYL ADEPDVVNVV
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