Gene Slin_1773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1773 
Symbol 
ID8725510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2143362 
End bp2144312 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content48% 
IMG OID 
Productvon Willebrand factor type A 
Protein accessionYP_003386617 
Protein GI284036687 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.229115 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.320362 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATCA GCAGTTGTCG GCGAATCATT GACCTACCCG TCGCGAGCCT GAATGCCAAA 
CCCTCAGCGG CAGCAACGTC CAGTCTTTCA ACTGGCTCTA CGGGTGTCGA AAAGCTCACT
TTTTCGGTAG ATGTATTCGT TGTTGACAAA AATGGGCGAC TCATCACCGG CCTGAAACCA
TCTAACTTCA AGATCGTCAA TACGGTCACG AATTTTTATG AACTCATTGA TGTGTCAACG
TCTAACCTGA TTTCTAAACC GGGCGGCTAT TCGGCTATGC TACTCCTCGA CCAAACCGGC
AGTATCAGTA CAACCGATCC ATACAATCTG CGGATCGAAG CCAGCAAAAT CTTTTTGAAC
AACCTGGGCA CAGATGATTA TACAGGCTTA ACGAGCTTCA CCTCCAGCTA TACCAGCGTA
GTAAAGTTAC ACAGCGGCTT TACCAACAAA ACGGAACAGA TGAAGAAATC GCTGGATACG
CTTGCCCTAA ATGTCAGCGG AGGTACTCCT CTCTATACCT CAACCATTCA ATCCGTTACG
TATACAGCTC AGAAGGGCCC GACAGCAAAC AAAGCGGTTA TCGTGTTCAC CGATGGTGAA
AACAATGTGA CGACGAATAC ACTGGAGGAT GCAACGGCAA AAGCCATTCA ACAAAAGATT
CCCCTTTTCA CGGTAGGGCT GAGCACCGAT GTGAATGTTA ACGTGCTGGC TCAGATGGCA
AATGAAACCG GGGGGGCGTT TTTCTACGCA AAAGATGCCG GACAGCTTAT CTCTACATTT
GGCACCCTGG GCAATCTGCT GCACGGACAG GGGCTAGTTT ACCGCACAAC ATGGTCGGTT
ACGAAAACCG GCAGCAAATG GGCGTCGGGG CAGATTATAT CAGCCACAAT ACTTGTAACT
CTCTTAGATG GCACTATCGT TGAAGTGCCC TTTTGGTTAA AGGTAAAGTA A
 
Protein sequence
MAISSCRRII DLPVASLNAK PSAAATSSLS TGSTGVEKLT FSVDVFVVDK NGRLITGLKP 
SNFKIVNTVT NFYELIDVST SNLISKPGGY SAMLLLDQTG SISTTDPYNL RIEASKIFLN
NLGTDDYTGL TSFTSSYTSV VKLHSGFTNK TEQMKKSLDT LALNVSGGTP LYTSTIQSVT
YTAQKGPTAN KAVIVFTDGE NNVTTNTLED ATAKAIQQKI PLFTVGLSTD VNVNVLAQMA
NETGGAFFYA KDAGQLISTF GTLGNLLHGQ GLVYRTTWSV TKTGSKWASG QIISATILVT
LLDGTIVEVP FWLKVK