Gene Slin_1714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1714 
Symbol 
ID8725451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2054899 
End bp2057025 
Gene Length2127 bp 
Protein Length708 aa 
Translation table11 
GC content48% 
IMG OID 
Productpeptidase M48 Ste24p 
Protein accessionYP_003386559 
Protein GI284036629 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.729234 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCCTT CTCCACCTGT TGACCACGCA CATGTAACGT TTTATCCACC GGCCCCCGAC 
CTGTCCGATA CCGGTTTTTT AGACCCATCA GCCACGTTTA GAAAAGAAGT CAGACGAACG
CTGGCAGGAA TTATCGGCTT TGCCGGTCTC TATCTGTTGC TGGTCGGGTT TGGTGTAGCA
CTCGGGTATG TTTGTGTGCT GAGTACCATC TGGTTAATAA GCTTTTCTAT AAATAAATTT
ACATTGATCA TTGGCGTGGG GCTGATTGCG CTTGGCGTCA TGTTTCTGCT CTTTCTGGTA
AAATTTCTCT TTGCCGTATA CAAGAATCAA AACGCCCAGC GGATTGAAAT TACCGCTGAG
GATCACCCGA ATCTGGTGAG GTTTATTCAT AAACTGGCCG AAGAGGTGAA CGCTCCTAAG
CCGTATAAGA TATTCCTGTC GCCGAATGTC AATGCCTGTG TCTTTTACAA TTCCAGCTTC
TGGAGTTTGA TCATGCCCGT ACAAAAGAAC CTTGAAATTG GACTGGGTTT GGTTAACTCT
GTTAACATGA GCGAGTTCAA AGCGGTTATG GCGCACGAGT TCGGGCACTT TTCTCAGCGG
TCCATGAAGC TGGGGAGTTA CGTCTATATC GTTAATCGGG TGATCTATAA TTTAGTATAT
GACCGTGACC GCTGGGATGC ATTGCTGGAT AAGTGGGTCG AATCGGGTGG GTTATGGGGG
ACGTTTGCGG GCCTCACTCA TATTTTGGTT AATCTGGTCC GTAGGGTACT CAGCAAAGCC
TACCAATGGC TGAATCTGCG GTATATGGGG TTGTCACGAG AAATGGAATA CCAGGCTGAT
CTGGTGGCAG TTAGTGCGGC CGGAGCGCAG CCGGTTATAA CCGCCCTTCG CCGGATTGAA
CTAGGTGATG CCGCTTATCA GCAGATGATA AGCTATCTGA ATGGATTGGT TGGCGAGTCG
AAAGTCGCTG AAAATATCTA CCCGCTACAC ACCGAAACGA TGCACATGCT GGCTTCGGAA
CTTGACATCG ATATACGGCA TGGGCTTCCT TTACTGACGG ATGAGCAGGC CAGTAAAATG
GTGGTAGCGC GCCGGGTAAA TTACGAGGAT CAGTGGTCAT CACATCCGGC GCAGGGAGAA
CGTGAGGCCA ATATTCGAAC GGTTTCGGCT CCCTGTATTC CCGATGAATC GTCGCCCTGG
CTGCTTTTTA CCAATCCTGA GCACTGGCAA AAAGAACTGA CAACCAGACT CTATGCCGGT
GTTGAGCTGA ACGCATCGGC CAACCGGCAG TTCATCCATA CATCGGAGTA TGTGGCTCAT
GTCGTTGACG AAGTTAATCG GGCGCAATTG CCCGAAAAGT ACAACGGCTT TTACGACAGG
AGGCTGTTAG CCACTTTTAC CCCCGATAGC GTAGCGTTGG AAACGAACGA GATTCCCGCT
GAAGAAACCA TTTTTTCGGA TGAAAACCGG CAATTAAGAA AGCAGCTCTT TACCGATTTT
GACGATCGGA ACACGTTGCT TCAGATCAAA GCCAGGCAGA TTCAAACCCG TACGTTCGAC
TTCGATGGAA AAAAATATGA CCGCAAAGAG GTTGATGCTG CACTGGCTGT TATCAATCCT
GAGATTGAGG AGTTACAGGC TTATTTTAAG CGTTTGGAGA TAGAGGCTTT TCGCTGGCAT
TATCAAAAAG CCGTACAGCA AGGGGTTGGC AATGAACTCA TTCAGCGGTA TGACCTGTAT
TTCAGAATTG ATCAGGATCG GGAGTTGTAT GAAGAGCTAC TGGTAGAGTA TACTGACTTG
ATCAAAAACA CGCAGGACGC GCTGAAAGAA GGAGGGACCA TTAAACGGGG AATGGGTGGG
CAGATTGATG CCATGAATGA TAAAATACAA AAGGCCTATA CAAACAGTCA AACCATAAGC
CTACCCTCGC AGGTGGGAGA GGTTACGTTT AGCAACGGGT ATGCGGCTTA TTTATGTGCT
GACCCTCTAC AGGTTATAGA CACCGGTTCA TTCAATTGGG AGCACATGGT GGCTTTATAC
AGACAGTTGG AGTTGATGCC GCACCTTGCC GGACAGGCTC AGCTTGCGGT TTTGGATGAA
CTTATTCGCT GGCAGGCAAC CTTATGA
 
Protein sequence
MIPSPPVDHA HVTFYPPAPD LSDTGFLDPS ATFRKEVRRT LAGIIGFAGL YLLLVGFGVA 
LGYVCVLSTI WLISFSINKF TLIIGVGLIA LGVMFLLFLV KFLFAVYKNQ NAQRIEITAE
DHPNLVRFIH KLAEEVNAPK PYKIFLSPNV NACVFYNSSF WSLIMPVQKN LEIGLGLVNS
VNMSEFKAVM AHEFGHFSQR SMKLGSYVYI VNRVIYNLVY DRDRWDALLD KWVESGGLWG
TFAGLTHILV NLVRRVLSKA YQWLNLRYMG LSREMEYQAD LVAVSAAGAQ PVITALRRIE
LGDAAYQQMI SYLNGLVGES KVAENIYPLH TETMHMLASE LDIDIRHGLP LLTDEQASKM
VVARRVNYED QWSSHPAQGE REANIRTVSA PCIPDESSPW LLFTNPEHWQ KELTTRLYAG
VELNASANRQ FIHTSEYVAH VVDEVNRAQL PEKYNGFYDR RLLATFTPDS VALETNEIPA
EETIFSDENR QLRKQLFTDF DDRNTLLQIK ARQIQTRTFD FDGKKYDRKE VDAALAVINP
EIEELQAYFK RLEIEAFRWH YQKAVQQGVG NELIQRYDLY FRIDQDRELY EELLVEYTDL
IKNTQDALKE GGTIKRGMGG QIDAMNDKIQ KAYTNSQTIS LPSQVGEVTF SNGYAAYLCA
DPLQVIDTGS FNWEHMVALY RQLELMPHLA GQAQLAVLDE LIRWQATL