| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1700 |
|---|
| Symbol | |
|---|
| ID | 8725437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 2035220 |
|---|
| End bp | 2036287 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF81 |
|---|
| Protein accession | YP_003386545 |
|---|
| Protein GI | 284036615 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.430216 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.257606 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCAGC GGATTGTCCC TGCAACCAAT ATGGCTTCTG ATTCGCTCAC AACGCCCCAA
CCGGAACTTG ACCTTAATGG ACTAACGATC ACGATTCAGG GCGATAATGC CTCATCACAG
GCAGCTATCA TACGGACCGT TTTTCCGACT GCCAGCGTAC AGACCGACGC ACCCAGCCCA
CTACTACGTC GACGTAATCG GACCGAAATT GCGATCTATA TCTTCTCGGC ACTGGCTCTG
ATGCTGGTAG GTCATCTGCT TTTTAGCTAC TTCACTTTGG ACCGGCTGAC GCTCCTGGCC
AGCACGATTG ACCTCACACC CGACATTTTT TACTTCATCA TGGCGGGCTT CGTTGCCCAG
ATGATTGATG GCGCCCTGGG TATGGCGTAT GGCGTTACGG CCACAACCTT CCTGACGAGC
GTAGGCATTA GCCCCTTATT TGCTACAGCC AGTGTGCACA GTTCCGAGAT TTTCACCAGT
GGCGTGTCGG GCTACATGCA CTTGAAATTT GGCAACGTAA ACAGCCGGTT ATTTAAGATC
GTCCTGATTC CGGGGGTCAT CGGCGCAGCA CTGGGGGCCT TTCTGATTAC GAAACTGGCC
GACATGGAAA TCGTTGCTCA ATACCTGAGC CCGGCGATTT CGGTCTACAC CGCCATATTG
GGTATCCTGA TTTTAAAGAA AGCCCTGGCT AAGCAAACAA AGAAAAAGCC CGTTCGTCAA
ATTGGCCTGC TGGCCTGGTT TGGCGGGTTC GTCGATGCAA TTGGGGGAGG AGGCTGGGGG
CCTATTGTCA ACTCAACGCT GATTGCTTCA GGGCGGCACC CACGCTACAC AATTGGGTCG
GTCAATCTGG CGGAGTTCTT CGTTTCGTTT GCCTCATCCG TCGTGTTTGC CCTGTATGCC
GGGCTGGATA ACTACGGGAT GGTTATTCTG GGCCTGATTC TTGGCGGTAT GATTGCGGCT
CCGATAGCAG CCCGTCTGGC TCAGAAATTA CCCGTTAAAA CCATGATGAT CCTGGTCGGA
ATTGTGGTGA TCCTCGTAAG TTTGCGAAAA ATTATTAAGT TCTTTTAG
|
|---|
| Protein sequence | MSQRIVPATN MASDSLTTPQ PELDLNGLTI TIQGDNASSQ AAIIRTVFPT ASVQTDAPSP
LLRRRNRTEI AIYIFSALAL MLVGHLLFSY FTLDRLTLLA STIDLTPDIF YFIMAGFVAQ
MIDGALGMAY GVTATTFLTS VGISPLFATA SVHSSEIFTS GVSGYMHLKF GNVNSRLFKI
VLIPGVIGAA LGAFLITKLA DMEIVAQYLS PAISVYTAIL GILILKKALA KQTKKKPVRQ
IGLLAWFGGF VDAIGGGGWG PIVNSTLIAS GRHPRYTIGS VNLAEFFVSF ASSVVFALYA
GLDNYGMVIL GLILGGMIAA PIAARLAQKL PVKTMMILVG IVVILVSLRK IIKFF
|
|---|
| |