Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1698 |
Symbol | |
ID | 8725435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 2032647 |
End bp | 2033771 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | oxidoreductase domain protein |
Protein accession | YP_003386543 |
Protein GI | 284036613 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.230248 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.186684 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACACA TTGTCTACTA CCTTACCCTG CTGTTTGCCA TGACTCAGTT TGCCAATGCT CAACCTACTA AAAAGCCGCT TCGGGTGGGC GTAGTGGGAT TGGTGCATTC GCACGTGCAT GGGATTTTGA ACAAAGCATT CAAACAGACC GGTCAGACGG ATATCGAGAT CGTCGGGATT GCCGAGCCGA ATCGGGAACT GGCCGAACGG TTCGCCAAAC AGCACGGTTA CCCAATGAGT CTGGTGTATG CCACCGTGGC CGAAATGCTT GAAAAGACCA AACCTGAAGC CGTAACGGAC TTCGGCCGGA TTGTCGACCA TAAAAAGACG GTGGAGTTAT GCGCCCCGCG TGGCATTCAT GTCATGGTTG AAAAGCCATT GGCCACCAGT TATGCCGATG CGCAGCAAAT GGCCGCACTG GCTAAAAAGA ATAACATCCA GTTGCTCACC AACTATGAAA CCACCTGGTA CGGCAGCAAC CATAAAGCAT ACGCCATTGC CAACACCGAG AAGTCAATCG GCGATTTGCG CAAGATTGTC GTGCACGATG GACACGAGGG ACCGAAGGAA ATCAATGTAA ACAAAGAGTT TCTGGACTGG CTGACCGACC CCGCTACAAA CGGTGCCGGT GCCCTGTTCG ACTTCGGGTG TTACGGGGCC AATCTTTCTA CCTGGCTCAT GCACAACCAG CGTCCGATAT CCGTTATGGC GGTGACTCAA CAGATCAAGC CAGACATCTA CCCGAAAGTG GACGACGAAG GCACAATCAT TCTGACTTAT CCAAAAACAC AGACCATTAT TCAGGCATCG TGGAACTGGC CATTCGCCCG TAAAGACATG GAAGTATACG GGCAAACAGG GTATGTGTTT ACCGTTGATG GCACCCGGAT GCGCATCCGG CTTAAGGGTG ACAAAAACGA GCAGCAGACC GAAGCAACAG CCTCCGATGC GCCTGCAACT GACCCATTTG CGTACTTCGC GAAGCTGATT CACGGCGAAA CTAAAGCCGA CGAATTAACG TCTTTAGAAA ACAATATTAT CGTCATGGAA ATCCTGGATG CCGCCCGACA ATCGGCCAAA ACGGGCAAGG CGGTAAATCT GTCACAACGG GCACAGGTCC GTTAA
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Protein sequence | MKHIVYYLTL LFAMTQFANA QPTKKPLRVG VVGLVHSHVH GILNKAFKQT GQTDIEIVGI AEPNRELAER FAKQHGYPMS LVYATVAEML EKTKPEAVTD FGRIVDHKKT VELCAPRGIH VMVEKPLATS YADAQQMAAL AKKNNIQLLT NYETTWYGSN HKAYAIANTE KSIGDLRKIV VHDGHEGPKE INVNKEFLDW LTDPATNGAG ALFDFGCYGA NLSTWLMHNQ RPISVMAVTQ QIKPDIYPKV DDEGTIILTY PKTQTIIQAS WNWPFARKDM EVYGQTGYVF TVDGTRMRIR LKGDKNEQQT EATASDAPAT DPFAYFAKLI HGETKADELT SLENNIIVME ILDAARQSAK TGKAVNLSQR AQVR
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