Gene Slin_1698 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1698 
Symbol 
ID8725435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2032647 
End bp2033771 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content52% 
IMG OID 
Productoxidoreductase domain protein 
Protein accessionYP_003386543 
Protein GI284036613 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.230248 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.186684 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACA TTGTCTACTA CCTTACCCTG CTGTTTGCCA TGACTCAGTT TGCCAATGCT 
CAACCTACTA AAAAGCCGCT TCGGGTGGGC GTAGTGGGAT TGGTGCATTC GCACGTGCAT
GGGATTTTGA ACAAAGCATT CAAACAGACC GGTCAGACGG ATATCGAGAT CGTCGGGATT
GCCGAGCCGA ATCGGGAACT GGCCGAACGG TTCGCCAAAC AGCACGGTTA CCCAATGAGT
CTGGTGTATG CCACCGTGGC CGAAATGCTT GAAAAGACCA AACCTGAAGC CGTAACGGAC
TTCGGCCGGA TTGTCGACCA TAAAAAGACG GTGGAGTTAT GCGCCCCGCG TGGCATTCAT
GTCATGGTTG AAAAGCCATT GGCCACCAGT TATGCCGATG CGCAGCAAAT GGCCGCACTG
GCTAAAAAGA ATAACATCCA GTTGCTCACC AACTATGAAA CCACCTGGTA CGGCAGCAAC
CATAAAGCAT ACGCCATTGC CAACACCGAG AAGTCAATCG GCGATTTGCG CAAGATTGTC
GTGCACGATG GACACGAGGG ACCGAAGGAA ATCAATGTAA ACAAAGAGTT TCTGGACTGG
CTGACCGACC CCGCTACAAA CGGTGCCGGT GCCCTGTTCG ACTTCGGGTG TTACGGGGCC
AATCTTTCTA CCTGGCTCAT GCACAACCAG CGTCCGATAT CCGTTATGGC GGTGACTCAA
CAGATCAAGC CAGACATCTA CCCGAAAGTG GACGACGAAG GCACAATCAT TCTGACTTAT
CCAAAAACAC AGACCATTAT TCAGGCATCG TGGAACTGGC CATTCGCCCG TAAAGACATG
GAAGTATACG GGCAAACAGG GTATGTGTTT ACCGTTGATG GCACCCGGAT GCGCATCCGG
CTTAAGGGTG ACAAAAACGA GCAGCAGACC GAAGCAACAG CCTCCGATGC GCCTGCAACT
GACCCATTTG CGTACTTCGC GAAGCTGATT CACGGCGAAA CTAAAGCCGA CGAATTAACG
TCTTTAGAAA ACAATATTAT CGTCATGGAA ATCCTGGATG CCGCCCGACA ATCGGCCAAA
ACGGGCAAGG CGGTAAATCT GTCACAACGG GCACAGGTCC GTTAA
 
Protein sequence
MKHIVYYLTL LFAMTQFANA QPTKKPLRVG VVGLVHSHVH GILNKAFKQT GQTDIEIVGI 
AEPNRELAER FAKQHGYPMS LVYATVAEML EKTKPEAVTD FGRIVDHKKT VELCAPRGIH
VMVEKPLATS YADAQQMAAL AKKNNIQLLT NYETTWYGSN HKAYAIANTE KSIGDLRKIV
VHDGHEGPKE INVNKEFLDW LTDPATNGAG ALFDFGCYGA NLSTWLMHNQ RPISVMAVTQ
QIKPDIYPKV DDEGTIILTY PKTQTIIQAS WNWPFARKDM EVYGQTGYVF TVDGTRMRIR
LKGDKNEQQT EATASDAPAT DPFAYFAKLI HGETKADELT SLENNIIVME ILDAARQSAK
TGKAVNLSQR AQVR