Gene Slin_1673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1673 
Symbol 
ID8725408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2009462 
End bp2010637 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content51% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003386519 
Protein GI284036589 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGCAT CTTCCGGCAC CAAAGGTCAA TTGGTGGTTA TTGTCTTTGC TCAATTCGCG 
GGTACTTCAC TTTGGTTTGC GGGGAATGCC ATCCTGCCCG AACTGCAAAC GCTCCTGAAA
ACCAACACCC TGACTGGTTG GATTACCTCA TCGGTACAGA TTGGCTTCAT TGTCGGTACG
CTCACGTATG CCATTTTAGC CATACCTGAC CGTTTTCGGT CAACCTATGT ATTTCTGCTA
TCTGTAGTCC TGGCAGCTTT AGTTAACTTA ATCTGGCTGC TGCTGCCCTT AACGGCAGAA
ACGGTTCTGG CGAGCCGGTT CTTTACCGGT TTCTTTCTGG CAGGCGTTTA TCCGGTAGGT
ATGAAGATTG CCGCCGATCG GTTCAAAGCC GAATTAGGTA AGGCAATGGG TTTTCTGGTT
GGTGCTTTGG TACTGGGTAC TGCTTTTCCG CACCTCATCC GGGGGCTGGG CGGTAATCTG
CCGTATCGTA CCCTGATGAT ATGGGTCTGT TTACTCGCGA TGAGCGGTGG TATTCTACTA
ACGCTGGTTG TGCCCGCTAC TTCCCGAAAA AGTACTGGCA ACCTCTTTCG TTTCCAGGCT
CTTCTGACAG TGTGGAAACC ATCAGCCTTT CGACCGGCCA TGCTTGGGTA CTTTGGCCAT
ATGTGGGAAC TCTATACACT TTGGGCTTTT CTGCCGACAT TACTGGTTTA CTATAGTCAA
CAACACCCGA CCATCAACAC ATCGATTTCT CTTTGGGCCT TTGGGGCTAT TGCTGCCGGA
GCCGTCGGCT GCGTCGGCGG AGGGTATCTG GCGTTACGGA TTGGTAGTGG CCGGGTTGCC
CGGTATCTAT TACTTACGTC TGGGCTATGT ATCGTGCTGC TGCCATGTAT GCTGACATTG
CCACCCTACC TTTTTGGTCT CTTTTTATTG CTCTGGGGAG CTACGGCCGC CGGTGACTCC
CCCCAGTTTT CGACCTTGGT TGCCAGTAAT GCCTTTGTCG AGAATCGGGG CAGTATTCTA
ACCCTGGTTA CCTGCTTCGG CTTTTTACTG ACGGTTCTGT CCATTCAATT CATGGCCTGG
ATGATTGGTA CGATTGGCCT GTCTGGCTGG TTTTTTTATA TACTGATTCC CGGCCCTTTA
TTAGGAATCC GGGCCATGCG TACCTACGCT CAATGA
 
Protein sequence
MLASSGTKGQ LVVIVFAQFA GTSLWFAGNA ILPELQTLLK TNTLTGWITS SVQIGFIVGT 
LTYAILAIPD RFRSTYVFLL SVVLAALVNL IWLLLPLTAE TVLASRFFTG FFLAGVYPVG
MKIAADRFKA ELGKAMGFLV GALVLGTAFP HLIRGLGGNL PYRTLMIWVC LLAMSGGILL
TLVVPATSRK STGNLFRFQA LLTVWKPSAF RPAMLGYFGH MWELYTLWAF LPTLLVYYSQ
QHPTINTSIS LWAFGAIAAG AVGCVGGGYL ALRIGSGRVA RYLLLTSGLC IVLLPCMLTL
PPYLFGLFLL LWGATAAGDS PQFSTLVASN AFVENRGSIL TLVTCFGFLL TVLSIQFMAW
MIGTIGLSGW FFYILIPGPL LGIRAMRTYA Q