Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1646 |
Symbol | |
ID | 8725381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 1980196 |
End bp | 1980732 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | NUDIX hydrolase |
Protein accession | YP_003386492 |
Protein GI | 284036562 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.637473 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACCGAA ATCCCCTTCT TTCGTTGCTT CAGCAATATA GTCCGGCCGA TACGCATGAA CAGGCCATGA CCCAGGAAAC CATCGATTTC GTGCGGGCAA ATCCTAACTG CTTCGACCGG TCGTTACTCG TTGGCCACGT TACGGGGTCC GCCTGGATAT GCAGCCCCGA CCGGCAACAA GTTCTCCTGA TTCATCATCG AAAACTCGAC CGCTGGCTGC AACCCGGCGG TCATGCCGAT GGTGACCCCG ATGTGCTCGC CGTTGCCCTG CGGGAGGCAC AGGAAGAAAC CGGGCTAACA TCCCTGAAAG TCCTTTCCAA TGCCATCTTC GACATCGATA TTCACGAAAT ACCCGCCCGA AAAGATGTCC CCGCACACTT GCATTACGAT ATTCGATTTT TGTTTGAAGC AGACCCGACA GAGCCATTCG GTAATTCCGA AGAAATTAGA AATATTAGAT GGTTTTCGTT GAAAAATGCC GAACAACAAG TAAAGGAAGG GTCTATTCTG CGGATGCTGA GAAAAAAAAT GGAATAA
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Protein sequence | MYRNPLLSLL QQYSPADTHE QAMTQETIDF VRANPNCFDR SLLVGHVTGS AWICSPDRQQ VLLIHHRKLD RWLQPGGHAD GDPDVLAVAL REAQEETGLT SLKVLSNAIF DIDIHEIPAR KDVPAHLHYD IRFLFEADPT EPFGNSEEIR NIRWFSLKNA EQQVKEGSIL RMLRKKME
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