Gene Slin_1646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1646 
Symbol 
ID8725381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1980196 
End bp1980732 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content50% 
IMG OID 
ProductNUDIX hydrolase 
Protein accessionYP_003386492 
Protein GI284036562 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.637473 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCGAA ATCCCCTTCT TTCGTTGCTT CAGCAATATA GTCCGGCCGA TACGCATGAA 
CAGGCCATGA CCCAGGAAAC CATCGATTTC GTGCGGGCAA ATCCTAACTG CTTCGACCGG
TCGTTACTCG TTGGCCACGT TACGGGGTCC GCCTGGATAT GCAGCCCCGA CCGGCAACAA
GTTCTCCTGA TTCATCATCG AAAACTCGAC CGCTGGCTGC AACCCGGCGG TCATGCCGAT
GGTGACCCCG ATGTGCTCGC CGTTGCCCTG CGGGAGGCAC AGGAAGAAAC CGGGCTAACA
TCCCTGAAAG TCCTTTCCAA TGCCATCTTC GACATCGATA TTCACGAAAT ACCCGCCCGA
AAAGATGTCC CCGCACACTT GCATTACGAT ATTCGATTTT TGTTTGAAGC AGACCCGACA
GAGCCATTCG GTAATTCCGA AGAAATTAGA AATATTAGAT GGTTTTCGTT GAAAAATGCC
GAACAACAAG TAAAGGAAGG GTCTATTCTG CGGATGCTGA GAAAAAAAAT GGAATAA
 
Protein sequence
MYRNPLLSLL QQYSPADTHE QAMTQETIDF VRANPNCFDR SLLVGHVTGS AWICSPDRQQ 
VLLIHHRKLD RWLQPGGHAD GDPDVLAVAL REAQEETGLT SLKVLSNAIF DIDIHEIPAR
KDVPAHLHYD IRFLFEADPT EPFGNSEEIR NIRWFSLKNA EQQVKEGSIL RMLRKKME