| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1624 |
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| Symbol | |
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| ID | 8725359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 1955497 |
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| End bp | 1956981 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | |
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| Product | beta-lactamase domain protein |
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| Protein accession | YP_003386470 |
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| Protein GI | 284036540 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.783658 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0292664 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGATTTA TTTATTTACT AACGACCCTA TTGGCAGGCA CAGTCCCCGT GTGGGCGCAG
ACCATCACAA ATTATCAAAA AGCGCTATCG GTTTTACAAA AAGCCATTTC GGCCACTGGC
AAAGACGTTC CAGCGGGTCT GCTGCTGACC ACAAGCGGCA CAATTCACAA TTTGGGTCAT
TATGATGTGC CCGAAAAAAC AAAAGATATA CCCGTTGAAG AGAAACTGGC CTATTTCGAG
CCGGAACAGG TTTCTTATGT ACGTAGTGTG ATTCAGAATA ACGGAGGTTC CTATATCAGT
GCCTCCGTAA GCAAATCGGA CTCGCTCTAC TCAATTGGCT ATTTTGACCG AACGCTGGTC
AAGTCCAACG CTCAGGGATT TCGTTATGAA GCGGCCAAAG CTTTGCCCAT TAAACTGTTG
CAGTTTGCCT ATGCCAATCG GCAGTCATTA CGCTACCTGG GCGAGCAGGG AAAACATAGC
CTGCTTTCAT TCAGCGACAA ACCCAACGAT GCCGTAACCA TCTACATTAA CTCAAAAACC
TTTTTGGTGG AGAAGGTAGA AAAAATAGTG TATAACGACC GCTATGGGGA TGTATCCTTC
TGTAGCGAAT ACAAAGGCTA CGAAGATAAG AATGGACTTA AAGTACCAAC CAGCCGGTCA
GATTATGAAT TTGGCATCCT GGAACGCGAA ATGACGTATA CAGAGATTCG TTCTGGCATT
AAATCCGATA CCAGCGATCT ACAGCTTCGG TGGGTTCCGG TGGCATTTCG CACTAAACTG
GCAGAGATCA ACCAAAAAAG TGAGTCATTG GTGGTTGAAA CGATTGCGCC AAACATTGAT
TTGATCAAGA TCATGTCACA AAATAATAAA GTACTGGTCG TTCAGTTTAG CGATCATGTA
GCCTTGTTTG AAAGCCCTTC CGGTATTGGT TTAAACCAGC AGATTCTCAG CGAAATTCAA
AAGCGCTACC CTCAAAAGCC ACTTCGTCAG GTTTTTCTTA CCCACCACCA CCCCGACCAT
GCGGGCGGCA TTCGTGCCTT CGCTGATTTG CCCGTCATGT TTGTGACAAC AGCAGGTAAT
GAAGCCTATT TTAAAAAGTT ACTGACAAAC ACTCATACGC TGGGTAACGC CAATACGACA
AACGGACAAA ACTATACCTT CGACTTTGTA CCGCTTGATG GTCAGGAAAC GTATAAAGAC
AAGCAAACGG AAGTTGTTGC CTATGAAATT GGTAAAGGCA CCAGCCATAC GGCAGAGCAT
TTGGCGTTCT ATTTTCCACA ACAGAAATTA CTCTGGTCCG GCGATTTGTT GTTCTTCCGG
GTAGATGGCC GGATTTCGCC CGCTGGCGAG CGGGGTAAAG CTGTTTATAA TCTGATCAGC
AAAAACAATC TTGCTGTCGA CAAAATTTAT ACCGCCTGGC CCTTGAATGG GCAAGCCGCT
TTTGGCACTG TAGACGATTT ACGCAAATCG GTCGAACTAA AATAA
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| Protein sequence | MRFIYLLTTL LAGTVPVWAQ TITNYQKALS VLQKAISATG KDVPAGLLLT TSGTIHNLGH
YDVPEKTKDI PVEEKLAYFE PEQVSYVRSV IQNNGGSYIS ASVSKSDSLY SIGYFDRTLV
KSNAQGFRYE AAKALPIKLL QFAYANRQSL RYLGEQGKHS LLSFSDKPND AVTIYINSKT
FLVEKVEKIV YNDRYGDVSF CSEYKGYEDK NGLKVPTSRS DYEFGILERE MTYTEIRSGI
KSDTSDLQLR WVPVAFRTKL AEINQKSESL VVETIAPNID LIKIMSQNNK VLVVQFSDHV
ALFESPSGIG LNQQILSEIQ KRYPQKPLRQ VFLTHHHPDH AGGIRAFADL PVMFVTTAGN
EAYFKKLLTN THTLGNANTT NGQNYTFDFV PLDGQETYKD KQTEVVAYEI GKGTSHTAEH
LAFYFPQQKL LWSGDLLFFR VDGRISPAGE RGKAVYNLIS KNNLAVDKIY TAWPLNGQAA
FGTVDDLRKS VELK
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