Gene Slin_1618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1618 
Symbol 
ID8725353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1948484 
End bp1949521 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content52% 
IMG OID 
Productaminodeoxychorismate lyase 
Protein accessionYP_003386465 
Protein GI284036535 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.122439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.126639 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGCA ATTTGCAAAT CGGTCTGTTC CTCACCGTAT CCATCCTCTT AACGACTTTT 
ACGTTTTACT TCTGGCAGGT GTTCAGAAGT CCGAATCTGC TGGTTCAGGA CAATGATAAA
ACGTTCGCCT TACTCATTCC GAAGGGCGCC ACCTTCGAGT CGGTGATGGA CACGCTTAAG
ACCCACAAAG TTATCAACGA CGAAACCTCA TTCCGCTTTC TGGCCAAGAT GATGAAGTAC
CCGGAGCGGG TGAAAGAAGG GCGCTACGAG ATAAAACCCA AGATGGGCAA TCGCGAGGCC
CTCGTCAAAC TACGCAGCGG CAGTCAGGAT GCCATGCCGG TAACGTTTAA CAGCATGCGC
CAGAAAAGCG ACCTGATTCA GCGGCTGGGC AGCAAATTCG AATTTGGCCC CGATGCACTG
GGTAAATTGC TCAATGACCC GGCCACCTGC CAGAAGTTCG GCTTCGATAC CACGACTATT
GTGTGTTTAT TCTTACCTAA TACGTATGAA TTTTTCTGGA CCATCAAGCC CGAAGCGCTT
CTGGAGCGGA TGGGTAGCGA ATACAAGAAG TTCTGGACCC CTGAGCGGCA GGCCAAAGCG
AAAGCATTGG GACTCAGCCA GACCCAAACC CAGATTCTGG CATCTATCGT AGCCGCCGAA
ACTAACAAAC GAGATGAGCA GCCCCGCGTG GCGGGTGTGT ACCTGAACCG TCTCAAACGC
GGTATCAAAC TCGAAGCCGA TCCAACCGTA ATTTTTGCCC TGCGCGATTT TACCATTCGC
CGGTTGTTAA ACAAACAACT AACGGTCGAT TCGCCGTACA ACACGTACCG ATACGCCGGT
TTACCGCCGG GGCCTATTAA CCTGCCGGCT CCGGGCACGA TCGATGCGGT CCTGAATGCC
GAACAGCATG ATTACCTCTA TTTTGTGGTA AACGCCAGCT TCAACGGCTA CCATACCTTC
TCAAAGACAC TGGCCGAACA CCTGGCCAAT GCCCGCCTGT ATCAGCAGGC CCTCACCCGA
ATGCAGATTA TGAAATAG
 
Protein sequence
MSRNLQIGLF LTVSILLTTF TFYFWQVFRS PNLLVQDNDK TFALLIPKGA TFESVMDTLK 
THKVINDETS FRFLAKMMKY PERVKEGRYE IKPKMGNREA LVKLRSGSQD AMPVTFNSMR
QKSDLIQRLG SKFEFGPDAL GKLLNDPATC QKFGFDTTTI VCLFLPNTYE FFWTIKPEAL
LERMGSEYKK FWTPERQAKA KALGLSQTQT QILASIVAAE TNKRDEQPRV AGVYLNRLKR
GIKLEADPTV IFALRDFTIR RLLNKQLTVD SPYNTYRYAG LPPGPINLPA PGTIDAVLNA
EQHDYLYFVV NASFNGYHTF SKTLAEHLAN ARLYQQALTR MQIMK