Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1618 |
Symbol | |
ID | 8725353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1948484 |
End bp | 1949521 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | aminodeoxychorismate lyase |
Protein accession | YP_003386465 |
Protein GI | 284036535 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.122439 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.126639 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCGCA ATTTGCAAAT CGGTCTGTTC CTCACCGTAT CCATCCTCTT AACGACTTTT ACGTTTTACT TCTGGCAGGT GTTCAGAAGT CCGAATCTGC TGGTTCAGGA CAATGATAAA ACGTTCGCCT TACTCATTCC GAAGGGCGCC ACCTTCGAGT CGGTGATGGA CACGCTTAAG ACCCACAAAG TTATCAACGA CGAAACCTCA TTCCGCTTTC TGGCCAAGAT GATGAAGTAC CCGGAGCGGG TGAAAGAAGG GCGCTACGAG ATAAAACCCA AGATGGGCAA TCGCGAGGCC CTCGTCAAAC TACGCAGCGG CAGTCAGGAT GCCATGCCGG TAACGTTTAA CAGCATGCGC CAGAAAAGCG ACCTGATTCA GCGGCTGGGC AGCAAATTCG AATTTGGCCC CGATGCACTG GGTAAATTGC TCAATGACCC GGCCACCTGC CAGAAGTTCG GCTTCGATAC CACGACTATT GTGTGTTTAT TCTTACCTAA TACGTATGAA TTTTTCTGGA CCATCAAGCC CGAAGCGCTT CTGGAGCGGA TGGGTAGCGA ATACAAGAAG TTCTGGACCC CTGAGCGGCA GGCCAAAGCG AAAGCATTGG GACTCAGCCA GACCCAAACC CAGATTCTGG CATCTATCGT AGCCGCCGAA ACTAACAAAC GAGATGAGCA GCCCCGCGTG GCGGGTGTGT ACCTGAACCG TCTCAAACGC GGTATCAAAC TCGAAGCCGA TCCAACCGTA ATTTTTGCCC TGCGCGATTT TACCATTCGC CGGTTGTTAA ACAAACAACT AACGGTCGAT TCGCCGTACA ACACGTACCG ATACGCCGGT TTACCGCCGG GGCCTATTAA CCTGCCGGCT CCGGGCACGA TCGATGCGGT CCTGAATGCC GAACAGCATG ATTACCTCTA TTTTGTGGTA AACGCCAGCT TCAACGGCTA CCATACCTTC TCAAAGACAC TGGCCGAACA CCTGGCCAAT GCCCGCCTGT ATCAGCAGGC CCTCACCCGA ATGCAGATTA TGAAATAG
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Protein sequence | MSRNLQIGLF LTVSILLTTF TFYFWQVFRS PNLLVQDNDK TFALLIPKGA TFESVMDTLK THKVINDETS FRFLAKMMKY PERVKEGRYE IKPKMGNREA LVKLRSGSQD AMPVTFNSMR QKSDLIQRLG SKFEFGPDAL GKLLNDPATC QKFGFDTTTI VCLFLPNTYE FFWTIKPEAL LERMGSEYKK FWTPERQAKA KALGLSQTQT QILASIVAAE TNKRDEQPRV AGVYLNRLKR GIKLEADPTV IFALRDFTIR RLLNKQLTVD SPYNTYRYAG LPPGPINLPA PGTIDAVLNA EQHDYLYFVV NASFNGYHTF SKTLAEHLAN ARLYQQALTR MQIMK
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