Gene Slin_1610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1610 
Symbol 
ID8725344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1939037 
End bp1939561 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content51% 
IMG OID 
Productferric uptake regulator, Fur family 
Protein accessionYP_003386457 
Protein GI284036527 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.596418 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.587643 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCTC CGACGCAAAC AAATTTAGAC GCTGCTCAGA TGATTTTTCG GGCCTACCTT 
GAGCGGAAGG GTCTCCGGAA AACTCCCGAG CGGTTTGCCA TTCTTGAAGA GATTTACAAT
CGCCAGGACC ACTTCGATGT GGACGAGTTG TATATCTCGA TGAAAAATAA AAAATACCGG
GTTAGCCGTG CTACGGTTTA CAATACCCTG GATGTACTGG TTGACTGCGA TCTGGTTACC
AAGCACCAGT TTGGCCGTAA CCTGGCCCAG TACGAAAAAT CGTACGGCTA CCGGCAGCAC
GACCACCTCA TCTGTACCGA CTGCCATAAG GTGATGGAAT TCTGCGACCC GCGCGTCCAG
AATATCCAGA ACATGGTGGG CGACATGCTG AAATTTAATG TCATGCACCA CTCCCTGATT
TTCTACGGCT CCTGCGCCCG CGACATATGC GAAAACAGAC AGATTACGGA GAAGGATCAA
CAGGGGCGGT CCGTCGATAC GGTGCAGATT CCAGTAGAGG GATAA
 
Protein sequence
MPAPTQTNLD AAQMIFRAYL ERKGLRKTPE RFAILEEIYN RQDHFDVDEL YISMKNKKYR 
VSRATVYNTL DVLVDCDLVT KHQFGRNLAQ YEKSYGYRQH DHLICTDCHK VMEFCDPRVQ
NIQNMVGDML KFNVMHHSLI FYGSCARDIC ENRQITEKDQ QGRSVDTVQI PVEG