Gene Slin_1608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1608 
Symbol 
ID8725342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1937169 
End bp1938455 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content52% 
IMG OID 
Productadenylosuccinate synthetase 
Protein accessionYP_003386455 
Protein GI284036525 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.395219 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.555835 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATG TTTTATTAGG CCTCCAGTGG GGCGACGAAG GAAAAGGGAA AATTGTGGAC 
GTACTGGCTC CGCAGTATCA GGTAGTGGCC CGTTTTCAGG GTGGTCCCAA TGCCGGACAT
ACTCTGGAAT TTAACGGACT GAAGCACGTT TTGCACCAGA TTCCGTCGGG TATTTTTCGG
AACGATATCC TCAATATCAT TGGAAACGGT GTTGTACTCG ACCCCATTGT CTTCAAAAAA
GAAATTGACG GCCTCGCAAA ATATAACCTG CCCCTGACCG AGAACCTGCA AATCTCCCGT
AAAGCGTCCA TTATCCTGCC AACCCACCGT CTGCTCGATG CCGCCTACGA GCAGGCAAAG
GGCGAGTCAA AAATTGGGTC GACACTCCGG GGTATTGGCC CAACTTATCA GGATAAAGTA
GCGCGTTTGG GTTTACGGGT CGGTGATGTC GAATCACCCA ACTTTCGGGC TAAGTACGAC
AAGCTGGCCG CCCTTCATAA AGTTATTCTG GAGCAGAATA ATTTTGATTA TGCTTCTGTT
TTGCCCCAGG CTGAAGACGA GTTCTTTGGC GCGGTGGAGT TTATGAAGCA GTTCCAGCTA
AACGACAGTG AGTATGCGGT GAACGAAGCC CTCACCAGTG GCAAGAAAGT GCTGGCCGAA
GGTGCCCAGG GATCGCTGCT CGACATTGAT TTCGGCTCTT ATCCATTCGT AACGTCGTCC
AGCACGATGG CCGCCGGTGC CTGCACCGGT CTGGGTGTTG CGCCCCGAAA AATTGGTGAG
GTGTTCGGCA TTTTCAAAGC CTACTGCACC CGTGTAGGAA GCGGCCCCTT CCCTACCGAA
CTCAACAATG AAGTTGGTGA GCAGATTCGG AAGGAAGGCC GTGAGTTTGG CGCAACAACC
GGACGGCCGC GCCGGTGTGG CTGGCTCGAT TTGCCCGCGC TGAAATACGC CATTATGATC
AACGGTGTTA CGCAACTGGT GATGATGAAA GTCGATGTCC TGAACATCTT CGACGAGATT
CAGGTATGTA CGCACTACAA ACTACCGGAT GGTACCATTA CCGAGCAGAT GCCATATGAC
CTTTGCGACA CGGATGTGAC CCCGATTTAC AAGTCGTTCA AGGGTTGGCA AACGGATTTG
ACCAACATCC GTTCGTTTGT CGATGTACCA GCCGAACTGG CAACGTATGT CTACTTCCTG
GAAGACACCC TGGGCCTGCC CATCAACTTT ATTTCGACCA GTCCCGACCG CGAAGCCATC
ATTCACCGTC AGGCGATCAT TGCTTAA
 
Protein sequence
MIDVLLGLQW GDEGKGKIVD VLAPQYQVVA RFQGGPNAGH TLEFNGLKHV LHQIPSGIFR 
NDILNIIGNG VVLDPIVFKK EIDGLAKYNL PLTENLQISR KASIILPTHR LLDAAYEQAK
GESKIGSTLR GIGPTYQDKV ARLGLRVGDV ESPNFRAKYD KLAALHKVIL EQNNFDYASV
LPQAEDEFFG AVEFMKQFQL NDSEYAVNEA LTSGKKVLAE GAQGSLLDID FGSYPFVTSS
STMAAGACTG LGVAPRKIGE VFGIFKAYCT RVGSGPFPTE LNNEVGEQIR KEGREFGATT
GRPRRCGWLD LPALKYAIMI NGVTQLVMMK VDVLNIFDEI QVCTHYKLPD GTITEQMPYD
LCDTDVTPIY KSFKGWQTDL TNIRSFVDVP AELATYVYFL EDTLGLPINF ISTSPDREAI
IHRQAIIA