Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1608 |
Symbol | |
ID | 8725342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1937169 |
End bp | 1938455 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | adenylosuccinate synthetase |
Protein accession | YP_003386455 |
Protein GI | 284036525 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.395219 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.555835 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGATG TTTTATTAGG CCTCCAGTGG GGCGACGAAG GAAAAGGGAA AATTGTGGAC GTACTGGCTC CGCAGTATCA GGTAGTGGCC CGTTTTCAGG GTGGTCCCAA TGCCGGACAT ACTCTGGAAT TTAACGGACT GAAGCACGTT TTGCACCAGA TTCCGTCGGG TATTTTTCGG AACGATATCC TCAATATCAT TGGAAACGGT GTTGTACTCG ACCCCATTGT CTTCAAAAAA GAAATTGACG GCCTCGCAAA ATATAACCTG CCCCTGACCG AGAACCTGCA AATCTCCCGT AAAGCGTCCA TTATCCTGCC AACCCACCGT CTGCTCGATG CCGCCTACGA GCAGGCAAAG GGCGAGTCAA AAATTGGGTC GACACTCCGG GGTATTGGCC CAACTTATCA GGATAAAGTA GCGCGTTTGG GTTTACGGGT CGGTGATGTC GAATCACCCA ACTTTCGGGC TAAGTACGAC AAGCTGGCCG CCCTTCATAA AGTTATTCTG GAGCAGAATA ATTTTGATTA TGCTTCTGTT TTGCCCCAGG CTGAAGACGA GTTCTTTGGC GCGGTGGAGT TTATGAAGCA GTTCCAGCTA AACGACAGTG AGTATGCGGT GAACGAAGCC CTCACCAGTG GCAAGAAAGT GCTGGCCGAA GGTGCCCAGG GATCGCTGCT CGACATTGAT TTCGGCTCTT ATCCATTCGT AACGTCGTCC AGCACGATGG CCGCCGGTGC CTGCACCGGT CTGGGTGTTG CGCCCCGAAA AATTGGTGAG GTGTTCGGCA TTTTCAAAGC CTACTGCACC CGTGTAGGAA GCGGCCCCTT CCCTACCGAA CTCAACAATG AAGTTGGTGA GCAGATTCGG AAGGAAGGCC GTGAGTTTGG CGCAACAACC GGACGGCCGC GCCGGTGTGG CTGGCTCGAT TTGCCCGCGC TGAAATACGC CATTATGATC AACGGTGTTA CGCAACTGGT GATGATGAAA GTCGATGTCC TGAACATCTT CGACGAGATT CAGGTATGTA CGCACTACAA ACTACCGGAT GGTACCATTA CCGAGCAGAT GCCATATGAC CTTTGCGACA CGGATGTGAC CCCGATTTAC AAGTCGTTCA AGGGTTGGCA AACGGATTTG ACCAACATCC GTTCGTTTGT CGATGTACCA GCCGAACTGG CAACGTATGT CTACTTCCTG GAAGACACCC TGGGCCTGCC CATCAACTTT ATTTCGACCA GTCCCGACCG CGAAGCCATC ATTCACCGTC AGGCGATCAT TGCTTAA
|
Protein sequence | MIDVLLGLQW GDEGKGKIVD VLAPQYQVVA RFQGGPNAGH TLEFNGLKHV LHQIPSGIFR NDILNIIGNG VVLDPIVFKK EIDGLAKYNL PLTENLQISR KASIILPTHR LLDAAYEQAK GESKIGSTLR GIGPTYQDKV ARLGLRVGDV ESPNFRAKYD KLAALHKVIL EQNNFDYASV LPQAEDEFFG AVEFMKQFQL NDSEYAVNEA LTSGKKVLAE GAQGSLLDID FGSYPFVTSS STMAAGACTG LGVAPRKIGE VFGIFKAYCT RVGSGPFPTE LNNEVGEQIR KEGREFGATT GRPRRCGWLD LPALKYAIMI NGVTQLVMMK VDVLNIFDEI QVCTHYKLPD GTITEQMPYD LCDTDVTPIY KSFKGWQTDL TNIRSFVDVP AELATYVYFL EDTLGLPINF ISTSPDREAI IHRQAIIA
|
| |