Gene Slin_1602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1602 
Symbol 
ID8725336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1930532 
End bp1931488 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content50% 
IMG OID 
Product2OG-Fe(II) oxygenase 
Protein accessionYP_003386449 
Protein GI284036519 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.29559 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGTAG AAGAATTATA CAATGAAATA CCGTCATTGG ATTTGGCGGA TTTCACATCA 
GGAGACCCCG AACGTAAAGC CCGTTTTGTA CAGGATTTAG GGCGGGCATT TAATCAGATT
GGGTTCGTCG CTATCCGTAA TCATGGATTA ACCAACGAGT TGACAACGAA ACTCTACGAT
GCAGCGCAAT CTTTTTTCTC CTCGCCCGAT TCACTCAAAC AGAAGTATGA ACGTCCTGAT
TTGAATGGAC AGCGAGGGTA TATTGGAAAA GGAAAGGAAA CTGCCAAAGG ATTTAAGGTT
GCGGACCTGA AAGAATTTTA CCACATTGGT CAGCCCGAAC CGGTTGGAGA TATGCCAGCC
AACGTGCTGC CCGACGAGTT TCCCGAATTT AGTGAAGCTA CTCAAACCGC TTACCGGACC
CTCGAAAATG CGGGTAAGCA ACTGTTGCGG GCTATTGCCC TGTACCTCGA ACTGCCCGAA
AGCTACTTTG ATGATAAAGT ACAGAATGGC GACAGTATTT TGCGGGCTTT ACATTACTTC
CCTCTCGACC CCGATACAAC GCCCGATGGC GCAGTAAGAG CCGCTCCTCA CGGCGATATT
AACCTGATTA CGCTGCTGAT GGGGGCATCG GCCGACGGGC TCGAAGTGCT GCGCCGTGAT
GGTAAATGGA TTGGCATAAC CGCCCTGCCC GATCAGGTAG TTGTGAACGT GGGTGATATG
TTGGACCGGT TAACCAACCA CAAACTGAAA TCGACGATCC ACCAGGTTGT TAATCCCCCG
CGCGAAAAAA TGAACCAGTC GCGCTATTCA ATTCCGTTCT TCATGCATCC CCGCGCAGAT
ATGGACCTGA CCAGCCTGGA AAGCTGTATC GACGCACAAC ATCCGAAGAT CTACGTCGAC
ATGACGGCGG GCGAGTTTCT GGATGAACGA CTGATGGAGC TTGGACTGAA AAAGTAA
 
Protein sequence
MIVEELYNEI PSLDLADFTS GDPERKARFV QDLGRAFNQI GFVAIRNHGL TNELTTKLYD 
AAQSFFSSPD SLKQKYERPD LNGQRGYIGK GKETAKGFKV ADLKEFYHIG QPEPVGDMPA
NVLPDEFPEF SEATQTAYRT LENAGKQLLR AIALYLELPE SYFDDKVQNG DSILRALHYF
PLDPDTTPDG AVRAAPHGDI NLITLLMGAS ADGLEVLRRD GKWIGITALP DQVVVNVGDM
LDRLTNHKLK STIHQVVNPP REKMNQSRYS IPFFMHPRAD MDLTSLESCI DAQHPKIYVD
MTAGEFLDER LMELGLKK