Gene Slin_1583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1583 
Symbol 
ID8725317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1912770 
End bp1913690 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content52% 
IMG OID 
ProductROK family protein 
Protein accessionYP_003386431 
Protein GI284036501 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.102637 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.230527 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAATT ATTGGGGAAT TGACCTTGGC GGCACCAAAA TAGAAGGTGT TATTTTATCG 
GCCCCCTCGC CAGATGCTGT CATTATTCGC AAACGTATTG ACACAGAGGC CCATTTGGGC
TACGACCATA TTATGAGTCA GATTGTTCGG CTCATCGACA TGCTCAAAGC CGAAACCGGC
CTTCAGCCAG ATCGTATTGG CTTTGGAACG CCCGGCACGT TTGACCCGGC ACGGCAAACG
ATGAAAAACT GCAATACGAC AGTCCTGAAC GGGCGGCCGA TGAAACAAGA CCTGGCCCGC
CTGCTCAATG TACCCGTAGC CGTAGCCAAC GACGCCAACT GCTTTGCCCT GGCTGAGTCG
ACCATGGGAA TTGTACTCGA TGTGGTTCCC AACTTTCAAA CCGTTTTTGG GGTGATTATG
GGTACCGGTG TTGGTGGTGG TGTCGTAATA CGCGGACGCG ATGGTGTACC TTTCGTGCTA
AACGGCCTAC AGGGAATTGG GGGCGAATGG GGCCACAATA TTCTGGAAGA AAACGGGCAT
GCCTGCTATT GCGGCAAACG CGGGTGTAAC GAGCAGGTAA TTTCCGGTCC GGCGCTGCAA
CGGTATTACC AGCAGATTAG CGGGGAGGAA CGGACTATGA AAGAAATCAT GGAGCGGTAT
CAGGCAGGAA ACGACCTGGT AGCCAGCCAA ACGGTCAACC GAATGCTTGA GTATTTTGGC
CGGGCCGTTT CAGTTATCAT TAATATCCTC GACCCCGATG CCATCGTTCT TGGCGGTGGG
GTTGGCAATG TCGATTTACT GTATACCGAA GGAGTCGAAC GGGCTAAAAA ATATGTTTTC
AACAGCCGCG AAATCAACAC GCGCTTCCTG AAACCAAAAT TGGGCGACAG CGCCGGAGTG
TTTGGAGCTG CATTGTTGTG A
 
Protein sequence
MQNYWGIDLG GTKIEGVILS APSPDAVIIR KRIDTEAHLG YDHIMSQIVR LIDMLKAETG 
LQPDRIGFGT PGTFDPARQT MKNCNTTVLN GRPMKQDLAR LLNVPVAVAN DANCFALAES
TMGIVLDVVP NFQTVFGVIM GTGVGGGVVI RGRDGVPFVL NGLQGIGGEW GHNILEENGH
ACYCGKRGCN EQVISGPALQ RYYQQISGEE RTMKEIMERY QAGNDLVASQ TVNRMLEYFG
RAVSVIINIL DPDAIVLGGG VGNVDLLYTE GVERAKKYVF NSREINTRFL KPKLGDSAGV
FGAALL