Gene Slin_1562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1562 
Symbol 
ID8725296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1877861 
End bp1878403 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content50% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003386410 
Protein GI284036480 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGTC TGATAAAATC TGTTTGCATC TTTACTCTTT TGGCAATTTT CACTAGTCAA 
ACATTTGCGC AAAAAGTCGC AGTTCCACCA GCACCTGGTC TGTCGTTTGT CGGGCAGCTG
AATGTAAAAG TTGGCAGTGC GTATGTGGTT GGAGAAACCC CGCATGGCAC CCGCCGAATT
ATTCCGATTC TGGGGGGCAC AGTTGAAGGT CCCGGCCTGA AGGGTGACAT TCTGCCCGGT
GGCTCCGATT GGCAGATTGT TCGAAAAGAT GGCGTGGCGG AATTGGAAGC CCATTATCAG
TTCAAAACCG ACGACGGGGT TATCATTTAT ATTAAAAATG TGGGTTTGCG CGTGGCCACG
CCCGATGTAG CGGCCCGCAT TGGCCGGGGT GAACAGGTGA GTCCGAGTGA GTATTACTTC
CGCGCAATTC CCAAATTCGA AGCACCCACC GGAAAATACG ACTGGATGAA CAACGCTATT
TTTATCTGTA CCGCCTTTCG CAACCCCGAA AACGTAGTCA TTCAGGTCTG GAAAGTACTT
TAA
 
Protein sequence
MSRLIKSVCI FTLLAIFTSQ TFAQKVAVPP APGLSFVGQL NVKVGSAYVV GETPHGTRRI 
IPILGGTVEG PGLKGDILPG GSDWQIVRKD GVAELEAHYQ FKTDDGVIIY IKNVGLRVAT
PDVAARIGRG EQVSPSEYYF RAIPKFEAPT GKYDWMNNAI FICTAFRNPE NVVIQVWKVL