Gene Slin_1558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1558 
Symbol 
ID8725292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1872776 
End bp1873987 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content50% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003386406 
Protein GI284036476 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGACCA TCGATGCGTC GACGGTCGGC ACTACCTTTT CTACCGTACG CCAGCCTAAA 
CTGCACCAAT ACCAGATAAA AAACATGAAA TACTATTTCA GCCTGTTGCT GGCGTTAAGC
CTCGTTGCCC ATGCCTTTGC CCAGAGCCCG GTCGCTAAAG TTGATTCAGG TAGGCTGAAA
GGTGGCCGGT ACATCATCCT CTACCCACCT AACTGGAAAG GGAAACTGGT TATGTTTGCG
CATGGCTATG AGTTCATGGG GTCGAAACCG TACCAGAGTC AAAACCCCGG CTTCGCTAAC
GCGATGAAGC CGTTTCTGGA ACGGGGTTTC GCGGTAGCCG CATCCGATTA TCAGTACCAG
GGTTTTGCGA TGCCGCAGGG CGTTGATGAT ACCGAAGAGC TACGGAAGTT TTTTACAAAA
ACCGTTGGTA AGCCCGATAC GACTTATATG GTTGGGCAGT CGATGGGTGG GGGCGTTGCC
CTGGCAACTA TCGAAAACTT TGGTGCTGCC TATAATGGAG GTCTGGGTCT TTGCGCATTT
TCCAGCCGCC CCTATCTCCA ATGCCGGAAA GAATACGATA TGTATGCCAC GTTCAACGGG
TTGTTTCCGG GAGTAGTTAC TTCCCTTTCT ACAATTTTTG ATCTGAAACA ACCCTACCAG
CCGCAACCCC GGCAGGCAAT GGTGGCGCAG GCAACGGCAA TTAAAAAAGC GATTCTGGCG
AAGGACTCGG TGTTGGCGTA TGCCTTTGCC AAACGGTTCG ATCTGAAATT TGAGGACCTG
CCCTTCTCTT TGTTTTTCAA TGAGAACGTC CTGCGCGACA TTGCCCAGAA AGCCAAAGGA
AATCCATTCG ACAATACCAA TACGGTATAC ACGGGTTTCC CGAATGATCT GGTCGTTAAT
CAAAAGGCAG AACGGTTACC CGCCACCGTT GACCCAAACG TGATTTTTGG AAAATACGAC
CGAACCGGTA AAATTGATAA GCCTGTTATG TTGTTACACA CCATCTACGA TCAACTTATT
CCACCCACCT ACGGGGTGGT GAATTTCGAG AATATGGTGC ATCAGCAGGG GAAAGATCAG
TATTTTACGG TCAACTACAC CAACGGGCAG GGACATTGCA ATTTTACGCC CCAGCAAACG
GGAAAAACGT TCGACGCCTT GCGAAACTGG GTTAAAACGG GGGCTAAACC TACGGCCGGA
TTTGTAAATT AA
 
Protein sequence
MPTIDASTVG TTFSTVRQPK LHQYQIKNMK YYFSLLLALS LVAHAFAQSP VAKVDSGRLK 
GGRYIILYPP NWKGKLVMFA HGYEFMGSKP YQSQNPGFAN AMKPFLERGF AVAASDYQYQ
GFAMPQGVDD TEELRKFFTK TVGKPDTTYM VGQSMGGGVA LATIENFGAA YNGGLGLCAF
SSRPYLQCRK EYDMYATFNG LFPGVVTSLS TIFDLKQPYQ PQPRQAMVAQ ATAIKKAILA
KDSVLAYAFA KRFDLKFEDL PFSLFFNENV LRDIAQKAKG NPFDNTNTVY TGFPNDLVVN
QKAERLPATV DPNVIFGKYD RTGKIDKPVM LLHTIYDQLI PPTYGVVNFE NMVHQQGKDQ
YFTVNYTNGQ GHCNFTPQQT GKTFDALRNW VKTGAKPTAG FVN