Gene Slin_1535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1535 
Symbol 
ID8725269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1853393 
End bp1854514 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content55% 
IMG OID 
Product3-oxoadipate enol-lactonase 
Protein accessionYP_003386383 
Protein GI284036453 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.267161 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.120644 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATCA ACTATAAACT ACAAGGTACA CCCAACAGCC CGGTACTGAT CTTCTCCAAC 
TCACTGGGGG CCGAGATGAT GATGTGGGAT GAACTGCTGC CCTTTTTGCT TCCTTACTTC
CGGGTGCTTC AATATGATAC GCGCGGGCAT GGCGGCAGCA CGACCACTCC AGGCCCCTAC
ACCATCGACC GGCTGGGGCA GGATGTAATT GACCTGATGG ACAGCCTGAA CATCGAACAG
GCGTTTTTCT GTGGCTTGTC GATGGGGGGG CTTATTGGGC AGTGGCTGGG CATTCATCAG
CCTCACCGCT TCAAAAAACT GGTGCTCAGT AATACCGGTG CTAAGATTGG TAACGACGAA
CGCTGGAATG GCCGCATTGC CACCATCACC GAACACGGGA TGCAGGCCAT TGCCGACGAC
ACCATGGAGC GTTGGTTTAC CGAAGGTTTC CGGTCAACAA ATCCACAGCG GGTAGCCGAT
ACCAAAGCCA TGTTCCTACG CTCGCCGGTT ACGGGATACG CAGCCTGTTG CGCGGCTATT
CGGGATGCCG ACTTTCGAGA CAACCTGAGC CAGCTATCCG TGGAAACACT GGTCATAACG
GGTGATGAAG ACCCGGTGAC GAACGTAGAA CAGGCCGAAT TTCTGCGCGA TAACATCCCC
AATGCCCAAC TGGCTATTCT GCCCGCCCGG CATTTGTCCA GTACTGAACT GCCGCAGCAA
TATGCGCAGG TATTGATCGA CTTTCTGATC GGCGAATCGA CCTTCGACAA GGGTATGCAC
GTTCGGCGGA CGGTGCTGGG TGATGCACAC GTCGACAAAG CCAATAGCCA GATAACCGAC
TTTACCGCCG ATTTTCAGCA GTTCATCACC AACTACGCCT GGGGTGAAAT CTGGACGCGG
CCGGGTCTGT CCAAACACAA CCGCAGCCTG ATCACACTGG CCATGCTGAT TGCGCTCAAC
CGCAAAGCCG AATTTCAGAT GCACGTTCGA GCCGCGTTGA ACAACGGTGT CAGCGCTGCC
GAAATCAAGG AGGTTATTAT GCAATCGGCC CTGTATTGCG GACTGCCAGC GGCCAACGAA
GCCTTTCACG CAGCCAGCGA AATCCTCAAT CAACAGCCAT GA
 
Protein sequence
MPINYKLQGT PNSPVLIFSN SLGAEMMMWD ELLPFLLPYF RVLQYDTRGH GGSTTTPGPY 
TIDRLGQDVI DLMDSLNIEQ AFFCGLSMGG LIGQWLGIHQ PHRFKKLVLS NTGAKIGNDE
RWNGRIATIT EHGMQAIADD TMERWFTEGF RSTNPQRVAD TKAMFLRSPV TGYAACCAAI
RDADFRDNLS QLSVETLVIT GDEDPVTNVE QAEFLRDNIP NAQLAILPAR HLSSTELPQQ
YAQVLIDFLI GESTFDKGMH VRRTVLGDAH VDKANSQITD FTADFQQFIT NYAWGEIWTR
PGLSKHNRSL ITLAMLIALN RKAEFQMHVR AALNNGVSAA EIKEVIMQSA LYCGLPAANE
AFHAASEILN QQP