Gene Slin_1514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1514 
Symbol 
ID8725248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1828426 
End bp1829364 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content56% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003386363 
Protein GI284036433 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.148663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGAAG GCAATACAGC CCATATTGTA TATGGCAAGG GCGAAGTGCT TTATTATACA 
ACGTTACGCA CGGGTGAACA GACGGAGTCT ACGATAAAAG TAGACAGTTT GCCGGGTTTG
CATCTGGGCG CATCGCGTGG TCCACAGATC GCCGTTTCGG CTCAATCGGT GGTGATTACG
GCCCTCGACA AAGCCGGGAA CGTATGGGCC TTTTCCCAAC GCAGAGACAC TGGAAAATGG
CAGAAACGCA TTCGCGTTAA TGACGTACCC GACATCGCCA AAGAGGGGTT TGTGGCCGTC
GCAGCGGGAC CGGACAACAG CTATACGGCT GTTTGGCTTG ATTTACGGGA CAACAAGCGG
AATAAACTGG CCGGGGCACA CTCAACGGAT GGCGGCCGTA CCTGGTCCGG CAATACGATC
CTGTACCAGT CACCTGACGG GACCATTTGT GAGTGTTGTC AGGTATCGGC AGTGAGCCGG
GGAAAGCAGG TAGCCGTTAT GTTTCGCAAC TTCCTGAATG GCTCGCGGGA TATGTACCTG
CTTCAATCGA CTAACGGCGG CCAGTCGTTT GGATCGGCGG AGAAACTGGG AGAAGGCACC
TGGCCGTTAA ACGCCTGCCC AATGGACGGT GGCGGCTTAG CCATCGGTCC CGACGGGAAG
ATTTCGACCG TCTGGCGACG AGCTGACAAG CTCTTTACCG CCCAGCCCGG ACAGCCCGAA
ATTGAACGGG CAACCGGCAA AAACCCGAAG ATTGCAACGA CTCGTAAAGG CGATTACATT
GTCTTTCAAC AGGCTGGTGA GCTTTGGGCG ATTCTGCCCG GTCAAACGCA GCCTGTTTCG
CTTGGGCCGG GCGCCTACGC CAAAATGGCC CGATTTGCTA ATGACCGGGT GCTGTGCCTG
TGGGAACAGG ATGGCACAAT CCGGGCAGCA ATGATTTAA
 
Protein sequence
MDEGNTAHIV YGKGEVLYYT TLRTGEQTES TIKVDSLPGL HLGASRGPQI AVSAQSVVIT 
ALDKAGNVWA FSQRRDTGKW QKRIRVNDVP DIAKEGFVAV AAGPDNSYTA VWLDLRDNKR
NKLAGAHSTD GGRTWSGNTI LYQSPDGTIC ECCQVSAVSR GKQVAVMFRN FLNGSRDMYL
LQSTNGGQSF GSAEKLGEGT WPLNACPMDG GGLAIGPDGK ISTVWRRADK LFTAQPGQPE
IERATGKNPK IATTRKGDYI VFQQAGELWA ILPGQTQPVS LGPGAYAKMA RFANDRVLCL
WEQDGTIRAA MI