Gene Slin_1486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1486 
Symbol 
ID8725220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1799205 
End bp1799999 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content53% 
IMG OID 
Productlipolytic protein G-D-S-L family 
Protein accessionYP_003386335 
Protein GI284036405 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.585939 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATGC GTGCAAAAAC CTCAAGACGT AGATTCCTGA AGTCGTCGGC TTTCCTTGGG 
CTGGCATCTG GTTCATTGCC AGAATTGGCT AAGGGCAATG CCCGACCTGA TGGTCAACAA
AAAGAAACCG GGCTTGTCTT CCTCTTTCAG GGCGATTCGA TAACCGACGG TAACCGGGGC
CGAAACACCG ACCCAAACCA CATTATGGGA CATGGGTATG CCTACGCAAT AGCCAGCCGA
ATCGGAGCTG ATTTCCCGGA GCGGGATTTT GTCTTTTATA ACCGGGGTAT CAGCGGCAAC
AAAATTACGG ACTTACAGAA GCGCTGGCAA CCCGACACGC TGGCTCTCAA ACCGGACGTG
CTCAGTATAT TGATCGGGAT CAATGATACG GGAGCAACCA TCAATAAACC CGCCGAGGCA
ACAACCCCGG AGCAGTTCGA AACGATCTAC CGTAGTTTGC TTGATGACTG CCGACGGGCT
AATCCAGAAA CCCTCTTTGT ATTGGGTATT CCGTTTGTGT ACCCCGTGGG CAGTCGGCAG
GATAACTGGG AGCGCTGGCA GAGTGACACC CGGAACCGGC AGGCGGTAAT CCGGAAACTA
GCGACCGAAT TCAACGCCGT AGTGGTCGAT TACCCCGCCG TTCTCGATCA GGCGATTGCG
CAAAAGAATA CGGAATACTG GGTGTGGGAC GGTATTCACC CAACAGTATT TGCGCATGAA
CTGATGGCTC GCGAATGGAT TAAGCAGGTA AGCAAGCGGC TGAAGTTCTT GAGGAAGTAC
AGACGCAGCT TTTAA
 
Protein sequence
MPMRAKTSRR RFLKSSAFLG LASGSLPELA KGNARPDGQQ KETGLVFLFQ GDSITDGNRG 
RNTDPNHIMG HGYAYAIASR IGADFPERDF VFYNRGISGN KITDLQKRWQ PDTLALKPDV
LSILIGINDT GATINKPAEA TTPEQFETIY RSLLDDCRRA NPETLFVLGI PFVYPVGSRQ
DNWERWQSDT RNRQAVIRKL ATEFNAVVVD YPAVLDQAIA QKNTEYWVWD GIHPTVFAHE
LMAREWIKQV SKRLKFLRKY RRSF