| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1461 |
|---|
| Symbol | |
|---|
| ID | 8725195 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 1771263 |
|---|
| End bp | 1772753 |
|---|
| Gene Length | 1491 bp |
|---|
| Protein Length | 496 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | exonuclease V subunit alpha |
|---|
| Protein accession | YP_003386310 |
|---|
| Protein GI | 284036380 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00677876 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.63958 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAA CCCAAACGGC CGCCCATTTG CTGGCCAAAC GTTTCCCTTT TAAGCCTACA
CCGGGTCAGG AACAGTTTTT CGAACAGATC GGCCAGTTTA TCTCCAAGGA AGAAGTTGCC
CATTATCGCG ATTGTTTTTT GCTGCGCGGC TATGCCGGTA CCGGCAAAAC CACCCTCGTA
GGTACCCTCA TAAAAGTACT TCCCCGTTTT GGCTATAAAT CGGTTCTGCT TGCTCCTACG
GGCCGGGCAG CCAAAGTCAT GACGAACTAT GCCAAGAAAC CAGCCCAGAC CATCCACCGG
AAAATATACA GACAGGTGGC TGACCCTGGC TCGGGAAATT TGGCTTTTCA GCGGCAGAAA
AATTACCACG AAGACACCCT GTTTATTGTC GATGAGGCTT CGATGATTTC CGATGAAGCC
GACTTTGGAG GGAAGGGGCT ACTGACCGAC CTGATTGATT TTGTCTTTGA AGGGCCGGGC
AACAAGCTCA TGCTGGTAGG CGATACAGCC CAGTTGCCCC CCGTTGGCCG GGAGTTGAGC
CCCGCCCTCG ACCGGGGTTT TCTGGCCAGT ACCTTCGACA TGACCGTGTA CGAACAGGAA
CTGACCGAAG TCATGCGACA GGACGAAGAA TCGGGAATCT TGTACAATGC GACGGGGTTA
AGGATGCTGC TGGACGGCAC CTCACCTACC CCCAAAGCCG TTGGTTTTGA TGCTTTGCTC
GATGACAACG CTTCGACCGC AACTGCTGAA ATCCCGCCTA TTCAACTTAA CGTTCGCTCG
TTCAGCGACA TTTACAAAAT GCCGTTGACC AAACTGGAAG ACGGTATCCG GTATGCGTAC
GACAAATACG GACGGGAGAA TACAGCCATC ATCTGCCGCT CCAACAAGTC GGCAGTACAG
TACAACCAGT TTGTTCGACG GATGATTGAC CAGTGCGAGG AAGAACTCGA CGCCGGGGAT
ATGCTCATGA TTGCCCGCAA CAACTACACC ATACTTGACG AGGATTCGCC GGCGGGTTTT
CTGGCCAACG GTGAATTTGC GGAAGTGCAA AAAATCCGCA ACAAGGAAGA AATGCACGGC
TTTCGCTTCG CCACGGTCAC GCTGCATCTG ATTGACTACG AAGAGCAGCC CGATTTCGAC
GCCAAAATCA TGCTCGACAC GCTCCATACG CCGGTCCCTT CGCTAACGGC CGATCAGTAC
AAGGCACTTT ACGAAAGTGT TGCCAAAGAC TACTTTTACA TTAAAAGCAA GAAAGAACGT
TCAGAAGCGA TACGTCGGGA CCCGTACCTC AACGCATTAC AGGTAAAATT TGCCTACGCA
CTCACCTGTC ATAAAGCGCA GGGGGGGCAA TGGAGTGCGG TTTTCGTTGA TCAGGGATTT
CTGCCGGAGG GTCAGGTGAA CGATGAATTT GTTCGATGGC TGTACACAGC TTTAACCCGC
GCCACCGACG AAGCCTTCCT GATGAATTTT AATTCGCAGT TTTTCGGATA A
|
|---|
| Protein sequence | MNETQTAAHL LAKRFPFKPT PGQEQFFEQI GQFISKEEVA HYRDCFLLRG YAGTGKTTLV
GTLIKVLPRF GYKSVLLAPT GRAAKVMTNY AKKPAQTIHR KIYRQVADPG SGNLAFQRQK
NYHEDTLFIV DEASMISDEA DFGGKGLLTD LIDFVFEGPG NKLMLVGDTA QLPPVGRELS
PALDRGFLAS TFDMTVYEQE LTEVMRQDEE SGILYNATGL RMLLDGTSPT PKAVGFDALL
DDNASTATAE IPPIQLNVRS FSDIYKMPLT KLEDGIRYAY DKYGRENTAI ICRSNKSAVQ
YNQFVRRMID QCEEELDAGD MLMIARNNYT ILDEDSPAGF LANGEFAEVQ KIRNKEEMHG
FRFATVTLHL IDYEEQPDFD AKIMLDTLHT PVPSLTADQY KALYESVAKD YFYIKSKKER
SEAIRRDPYL NALQVKFAYA LTCHKAQGGQ WSAVFVDQGF LPEGQVNDEF VRWLYTALTR
ATDEAFLMNF NSQFFG
|
|---|
| |