| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1402 |
|---|
| Symbol | |
|---|
| ID | 8725136 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 1703283 |
|---|
| End bp | 1704026 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003386251 |
|---|
| Protein GI | 284036321 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.526753 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.590124 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCTT ACGAACAAGC CGTCGAAACC GAATTGATTC GCTGGCAACA GGCGATGCAG
AAGCCTCCAA CCGCCTTTGG AAGACTCTCA ACCTCAATCC AGCGTCGTAT AAATCGGATT
ATCCCCGACC GTATTCACGC CATTATTACC GCTGCCATCA AGCAGATGAC CAGGGCTGTT
TTGTTCGGTG CCGAATTCCT AAACCGGGCA CCTGTTCAGG GGCAAACGCT GACACAGCGG
GATGCTGCCG TAGCCCGACG AATTGAATTT TATAAGAAAA CGAGTGCGGC CGAAGGAGGT
GTAACGGGGG CGGGCGGTAT TCTGCTCGGC CTGGCCGACT TCCCGCTGCT GCTTGGCCTG
AAGATGAAAA TGCTGTTCGA GATCGCCAGC CTCTATGGGT ATTCGGTAAG CGATTATCGG
GAGCGGGTAT TTATCCTGTA CGTTTTTCAA CTGGCGTTTT CCAGTCAGGA GCGTCGACAA
CAGGTGTATC AGCACATTGC CAACTGGACC GAACACAGCC GGGAATTACC CGAAGATATC
AACCAATTCG ATTGGCTTAC GTTTCAGCAG CAGTACCGGG ATTATATTGA TCTTGCCAAG
ATGGCGCAAC TCATACCGGG CATTGGAGCC GCAGTGGGTA TTGTGGTCAA CTATCGACTC
GTGAACCAGC TTGGTCAGAC GGCCATGAAT GCCTATCGAA TGCGGTTAAT GAGTAGTGCC
GAGCGTCAGC TCGGCACTAC ATAA
|
|---|
| Protein sequence | MTPYEQAVET ELIRWQQAMQ KPPTAFGRLS TSIQRRINRI IPDRIHAIIT AAIKQMTRAV
LFGAEFLNRA PVQGQTLTQR DAAVARRIEF YKKTSAAEGG VTGAGGILLG LADFPLLLGL
KMKMLFEIAS LYGYSVSDYR ERVFILYVFQ LAFSSQERRQ QVYQHIANWT EHSRELPEDI
NQFDWLTFQQ QYRDYIDLAK MAQLIPGIGA AVGIVVNYRL VNQLGQTAMN AYRMRLMSSA
ERQLGTT
|
|---|
| |