Gene Slin_1346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1346 
Symbol 
ID8725079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1641832 
End bp1642986 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content47% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003386195 
Protein GI284036265 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.748859 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.578477 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG TAATTTTACT TATTAGTTCT TTGTTTTTGG GTTTTACCGC TAACGCGCAA 
GATTCCACCA CCGTAACTCC AGGAAAATTC ACCTTTTCGG GGTACATGGA TACGTACTAC
TTTGGTAACT TCAACAACCC CAAAAGCCAG TCTAACCTAG GCTTGAACGG TGCGGGAGTT
GGTAACGCAC GGGCGTTTGA TCAACGGGCG GGTCAGTTTG GCATTGGTCT GGTACAGGCG
AAGGCAGTAT ACTCAGCCAG TAAGGTCGAC GCTGTCATGG ATTTGACGTT TGGGCCGTTT
TCTGATCTGG GTAACTATGG AAACTACATC GGTCCCTTAG GGCCGGGGTC TACTTCCCTG
GCAATCAAGC AGGCTTACAT TACTTACAAA GCAACGGACA AACTGTCGTT TACGGCGGGT
CAGTTTGGTA CTCACATTGG CTACGAAGTA ATTGATGCTC CGGTTAACTA CAACTACTCG
TTGTCTAACC TGTTCAACAA CGGTCCTTTC TATCACATTG GTCTCAAAGC GCAGTATGCT
TTCAGCGACC GGGCTTCGTT GATGGTAGGT TTAGTAAACA ACGTAGATAA TCTATACGAT
AACAACAAGA AGAAGGGCTT TATCAGCCAG TTGTTCTTTT CGCCGGTTTC GGGCTGGAAC
GTGTATTTGA ACGCTATCGT ATCGAACGAA GCATCGAAAG AAGTTGGAAA TGTGTCGGCT
GATAATGCTA ATTATCAACT GTTCGATCTG ACTACAACGT ATCAGGTTAC ATCGAAGTTT
TTCTTAGGCC TTAATGCCGC TACAGGCTCA CAAAAAGGAG ATTATCAGGG AACAGGCGGT
CCAACCACGT CTAAAAGCTG GGGCGGTGTA GCTGTATATT CTAATTATGC TTTCACCGAC
AAATTTGGCC TGGGCGTACG TTACGAGACG TTTGACAACA AGAATGGTGC TCGTGCCCTG
ACCGATGCTG CCGGAAATGG TGCCAGTGTA AACTCGATCA CCGTAACGGG GAACATCACT
GCTGCCGATG GGCACCTTCT CCTCAAACCC GAACTGCGAA TTGATAGCTA CTCGGCCAAT
AAATTTGAGA AGAACGATGG TTCGCTGACA ACCTCACAGG CGACGCTAGG CATGGCCGCT
ATCTTTAAGT TCTAG
 
Protein sequence
MKKVILLISS LFLGFTANAQ DSTTVTPGKF TFSGYMDTYY FGNFNNPKSQ SNLGLNGAGV 
GNARAFDQRA GQFGIGLVQA KAVYSASKVD AVMDLTFGPF SDLGNYGNYI GPLGPGSTSL
AIKQAYITYK ATDKLSFTAG QFGTHIGYEV IDAPVNYNYS LSNLFNNGPF YHIGLKAQYA
FSDRASLMVG LVNNVDNLYD NNKKKGFISQ LFFSPVSGWN VYLNAIVSNE ASKEVGNVSA
DNANYQLFDL TTTYQVTSKF FLGLNAATGS QKGDYQGTGG PTTSKSWGGV AVYSNYAFTD
KFGLGVRYET FDNKNGARAL TDAAGNGASV NSITVTGNIT AADGHLLLKP ELRIDSYSAN
KFEKNDGSLT TSQATLGMAA IFKF