Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1346 |
Symbol | |
ID | 8725079 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 1641832 |
End bp | 1642986 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003386195 |
Protein GI | 284036265 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.748859 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.578477 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAG TAATTTTACT TATTAGTTCT TTGTTTTTGG GTTTTACCGC TAACGCGCAA GATTCCACCA CCGTAACTCC AGGAAAATTC ACCTTTTCGG GGTACATGGA TACGTACTAC TTTGGTAACT TCAACAACCC CAAAAGCCAG TCTAACCTAG GCTTGAACGG TGCGGGAGTT GGTAACGCAC GGGCGTTTGA TCAACGGGCG GGTCAGTTTG GCATTGGTCT GGTACAGGCG AAGGCAGTAT ACTCAGCCAG TAAGGTCGAC GCTGTCATGG ATTTGACGTT TGGGCCGTTT TCTGATCTGG GTAACTATGG AAACTACATC GGTCCCTTAG GGCCGGGGTC TACTTCCCTG GCAATCAAGC AGGCTTACAT TACTTACAAA GCAACGGACA AACTGTCGTT TACGGCGGGT CAGTTTGGTA CTCACATTGG CTACGAAGTA ATTGATGCTC CGGTTAACTA CAACTACTCG TTGTCTAACC TGTTCAACAA CGGTCCTTTC TATCACATTG GTCTCAAAGC GCAGTATGCT TTCAGCGACC GGGCTTCGTT GATGGTAGGT TTAGTAAACA ACGTAGATAA TCTATACGAT AACAACAAGA AGAAGGGCTT TATCAGCCAG TTGTTCTTTT CGCCGGTTTC GGGCTGGAAC GTGTATTTGA ACGCTATCGT ATCGAACGAA GCATCGAAAG AAGTTGGAAA TGTGTCGGCT GATAATGCTA ATTATCAACT GTTCGATCTG ACTACAACGT ATCAGGTTAC ATCGAAGTTT TTCTTAGGCC TTAATGCCGC TACAGGCTCA CAAAAAGGAG ATTATCAGGG AACAGGCGGT CCAACCACGT CTAAAAGCTG GGGCGGTGTA GCTGTATATT CTAATTATGC TTTCACCGAC AAATTTGGCC TGGGCGTACG TTACGAGACG TTTGACAACA AGAATGGTGC TCGTGCCCTG ACCGATGCTG CCGGAAATGG TGCCAGTGTA AACTCGATCA CCGTAACGGG GAACATCACT GCTGCCGATG GGCACCTTCT CCTCAAACCC GAACTGCGAA TTGATAGCTA CTCGGCCAAT AAATTTGAGA AGAACGATGG TTCGCTGACA ACCTCACAGG CGACGCTAGG CATGGCCGCT ATCTTTAAGT TCTAG
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Protein sequence | MKKVILLISS LFLGFTANAQ DSTTVTPGKF TFSGYMDTYY FGNFNNPKSQ SNLGLNGAGV GNARAFDQRA GQFGIGLVQA KAVYSASKVD AVMDLTFGPF SDLGNYGNYI GPLGPGSTSL AIKQAYITYK ATDKLSFTAG QFGTHIGYEV IDAPVNYNYS LSNLFNNGPF YHIGLKAQYA FSDRASLMVG LVNNVDNLYD NNKKKGFISQ LFFSPVSGWN VYLNAIVSNE ASKEVGNVSA DNANYQLFDL TTTYQVTSKF FLGLNAATGS QKGDYQGTGG PTTSKSWGGV AVYSNYAFTD KFGLGVRYET FDNKNGARAL TDAAGNGASV NSITVTGNIT AADGHLLLKP ELRIDSYSAN KFEKNDGSLT TSQATLGMAA IFKF
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