Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1254 |
Symbol | |
ID | 8724987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 1533482 |
End bp | 1534639 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | putative esterase |
Protein accession | YP_003386103 |
Protein GI | 284036173 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.49724 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATAGTCA GTATGAATAC TTCCCGTTTT TTAGCCACGC TTTTTGCAAC AGTTGTTGCG GTTGGCGCTC TGGCGCAGGC CCCCCAGCGG ACGCCCACGC CCAACGACAC ACTCAAATCA CCCAAAGTAC TGGACGACAA GCGGGTCATG ATTCAGATTT ACGCGCCCAA AGCCAGTGAG GTAACCGTTG GGGGCGATTT TCTGTCGGGA GGCAAGCCCA TCAGCCTGAC AAAAAATGAC GTGGGTGTGT GGTCGGCAAC AACCAGCCCG CTCCGCCCGG ACTATTATTC GTACACGCTC ATGGTGGATG GTGTTCGGAC GATGGACCCC AAGAACCCGG TCATTAAACA GGGAATCAGC AGCCTCGAAA ACATCATGCT CGTGCCGGGT GCCGAAACCG CTTTCGAAGA CATCAAGGCC GTGCCGCATG GCGAAGTACG GGAGGTCTGG TATTCATCAA AAGCACTCAA CATGATGCGC CGGATGCACG TCTATACGCC ACCGGGCTAC GAAAAAGGCA CGACTAAATA CCCGGTTTTT TACCTGCTGC ACGGGGCTGG CGACGATGAT TCGGGCTGGA ATACCATTGG CCGGGCGGGC TTCATTATCG ACAACCTGCT GGCTGCCGGA CAGGCCAAAC CCATGATTGT GGTCATGCCC AACGGGAGCA TGCCGCTGCC CCCATCGAGT GGAATGAATG CCCAGGCCAT GAATACCATC CGGTCGATGT TCGCCAATGA CTTTCTTAAT GATGTGATGC CCCATGTGGA GAAAACGTAC CGAACCCTTC CCAATCGCGA AAACCGGGCA CTCGCGGGCT TGTCGATGGG GGGCTTCCAA ACGCTGGATG TGAGCCTGAC CCGCCCCGAA CTGTTCAACT ACGTTGGTGT ATTTAGCTCC GGGTTTTTCG GGGCTTCCAT CGATGAAGCT GAAACCAAGT ATGCTAAAGC CTTGAATGAC CCTTCGTTCA ACAAAAACAA GAAGCTGTTC TGGATCGGCA TCGGTAAAGA TGATTTTGTG ATGGACGCTA ACAAGAAAAC GCTGGCCCTG CTCGACAAGC ACCAAATCAA ATACCAGTAT AAAGAAACCT CCGGTGGGCA CACCTGGATC AACTGGCGGC AGTACCTCAA TGAATATGTA CCGCTGCTGT TCAAGTAG
|
Protein sequence | MIVSMNTSRF LATLFATVVA VGALAQAPQR TPTPNDTLKS PKVLDDKRVM IQIYAPKASE VTVGGDFLSG GKPISLTKND VGVWSATTSP LRPDYYSYTL MVDGVRTMDP KNPVIKQGIS SLENIMLVPG AETAFEDIKA VPHGEVREVW YSSKALNMMR RMHVYTPPGY EKGTTKYPVF YLLHGAGDDD SGWNTIGRAG FIIDNLLAAG QAKPMIVVMP NGSMPLPPSS GMNAQAMNTI RSMFANDFLN DVMPHVEKTY RTLPNRENRA LAGLSMGGFQ TLDVSLTRPE LFNYVGVFSS GFFGASIDEA ETKYAKALND PSFNKNKKLF WIGIGKDDFV MDANKKTLAL LDKHQIKYQY KETSGGHTWI NWRQYLNEYV PLLFK
|
| |