| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1254 |
|---|
| Symbol | |
|---|
| ID | 8724987 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 1533482 |
|---|
| End bp | 1534639 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | putative esterase |
|---|
| Protein accession | YP_003386103 |
|---|
| Protein GI | 284036173 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.49724 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAGTCA GTATGAATAC TTCCCGTTTT TTAGCCACGC TTTTTGCAAC AGTTGTTGCG
GTTGGCGCTC TGGCGCAGGC CCCCCAGCGG ACGCCCACGC CCAACGACAC ACTCAAATCA
CCCAAAGTAC TGGACGACAA GCGGGTCATG ATTCAGATTT ACGCGCCCAA AGCCAGTGAG
GTAACCGTTG GGGGCGATTT TCTGTCGGGA GGCAAGCCCA TCAGCCTGAC AAAAAATGAC
GTGGGTGTGT GGTCGGCAAC AACCAGCCCG CTCCGCCCGG ACTATTATTC GTACACGCTC
ATGGTGGATG GTGTTCGGAC GATGGACCCC AAGAACCCGG TCATTAAACA GGGAATCAGC
AGCCTCGAAA ACATCATGCT CGTGCCGGGT GCCGAAACCG CTTTCGAAGA CATCAAGGCC
GTGCCGCATG GCGAAGTACG GGAGGTCTGG TATTCATCAA AAGCACTCAA CATGATGCGC
CGGATGCACG TCTATACGCC ACCGGGCTAC GAAAAAGGCA CGACTAAATA CCCGGTTTTT
TACCTGCTGC ACGGGGCTGG CGACGATGAT TCGGGCTGGA ATACCATTGG CCGGGCGGGC
TTCATTATCG ACAACCTGCT GGCTGCCGGA CAGGCCAAAC CCATGATTGT GGTCATGCCC
AACGGGAGCA TGCCGCTGCC CCCATCGAGT GGAATGAATG CCCAGGCCAT GAATACCATC
CGGTCGATGT TCGCCAATGA CTTTCTTAAT GATGTGATGC CCCATGTGGA GAAAACGTAC
CGAACCCTTC CCAATCGCGA AAACCGGGCA CTCGCGGGCT TGTCGATGGG GGGCTTCCAA
ACGCTGGATG TGAGCCTGAC CCGCCCCGAA CTGTTCAACT ACGTTGGTGT ATTTAGCTCC
GGGTTTTTCG GGGCTTCCAT CGATGAAGCT GAAACCAAGT ATGCTAAAGC CTTGAATGAC
CCTTCGTTCA ACAAAAACAA GAAGCTGTTC TGGATCGGCA TCGGTAAAGA TGATTTTGTG
ATGGACGCTA ACAAGAAAAC GCTGGCCCTG CTCGACAAGC ACCAAATCAA ATACCAGTAT
AAAGAAACCT CCGGTGGGCA CACCTGGATC AACTGGCGGC AGTACCTCAA TGAATATGTA
CCGCTGCTGT TCAAGTAG
|
|---|
| Protein sequence | MIVSMNTSRF LATLFATVVA VGALAQAPQR TPTPNDTLKS PKVLDDKRVM IQIYAPKASE
VTVGGDFLSG GKPISLTKND VGVWSATTSP LRPDYYSYTL MVDGVRTMDP KNPVIKQGIS
SLENIMLVPG AETAFEDIKA VPHGEVREVW YSSKALNMMR RMHVYTPPGY EKGTTKYPVF
YLLHGAGDDD SGWNTIGRAG FIIDNLLAAG QAKPMIVVMP NGSMPLPPSS GMNAQAMNTI
RSMFANDFLN DVMPHVEKTY RTLPNRENRA LAGLSMGGFQ TLDVSLTRPE LFNYVGVFSS
GFFGASIDEA ETKYAKALND PSFNKNKKLF WIGIGKDDFV MDANKKTLAL LDKHQIKYQY
KETSGGHTWI NWRQYLNEYV PLLFK
|
|---|
| |