Gene Slin_1254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1254 
Symbol 
ID8724987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1533482 
End bp1534639 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content54% 
IMG OID 
Productputative esterase 
Protein accessionYP_003386103 
Protein GI284036173 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.49724 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGTCA GTATGAATAC TTCCCGTTTT TTAGCCACGC TTTTTGCAAC AGTTGTTGCG 
GTTGGCGCTC TGGCGCAGGC CCCCCAGCGG ACGCCCACGC CCAACGACAC ACTCAAATCA
CCCAAAGTAC TGGACGACAA GCGGGTCATG ATTCAGATTT ACGCGCCCAA AGCCAGTGAG
GTAACCGTTG GGGGCGATTT TCTGTCGGGA GGCAAGCCCA TCAGCCTGAC AAAAAATGAC
GTGGGTGTGT GGTCGGCAAC AACCAGCCCG CTCCGCCCGG ACTATTATTC GTACACGCTC
ATGGTGGATG GTGTTCGGAC GATGGACCCC AAGAACCCGG TCATTAAACA GGGAATCAGC
AGCCTCGAAA ACATCATGCT CGTGCCGGGT GCCGAAACCG CTTTCGAAGA CATCAAGGCC
GTGCCGCATG GCGAAGTACG GGAGGTCTGG TATTCATCAA AAGCACTCAA CATGATGCGC
CGGATGCACG TCTATACGCC ACCGGGCTAC GAAAAAGGCA CGACTAAATA CCCGGTTTTT
TACCTGCTGC ACGGGGCTGG CGACGATGAT TCGGGCTGGA ATACCATTGG CCGGGCGGGC
TTCATTATCG ACAACCTGCT GGCTGCCGGA CAGGCCAAAC CCATGATTGT GGTCATGCCC
AACGGGAGCA TGCCGCTGCC CCCATCGAGT GGAATGAATG CCCAGGCCAT GAATACCATC
CGGTCGATGT TCGCCAATGA CTTTCTTAAT GATGTGATGC CCCATGTGGA GAAAACGTAC
CGAACCCTTC CCAATCGCGA AAACCGGGCA CTCGCGGGCT TGTCGATGGG GGGCTTCCAA
ACGCTGGATG TGAGCCTGAC CCGCCCCGAA CTGTTCAACT ACGTTGGTGT ATTTAGCTCC
GGGTTTTTCG GGGCTTCCAT CGATGAAGCT GAAACCAAGT ATGCTAAAGC CTTGAATGAC
CCTTCGTTCA ACAAAAACAA GAAGCTGTTC TGGATCGGCA TCGGTAAAGA TGATTTTGTG
ATGGACGCTA ACAAGAAAAC GCTGGCCCTG CTCGACAAGC ACCAAATCAA ATACCAGTAT
AAAGAAACCT CCGGTGGGCA CACCTGGATC AACTGGCGGC AGTACCTCAA TGAATATGTA
CCGCTGCTGT TCAAGTAG
 
Protein sequence
MIVSMNTSRF LATLFATVVA VGALAQAPQR TPTPNDTLKS PKVLDDKRVM IQIYAPKASE 
VTVGGDFLSG GKPISLTKND VGVWSATTSP LRPDYYSYTL MVDGVRTMDP KNPVIKQGIS
SLENIMLVPG AETAFEDIKA VPHGEVREVW YSSKALNMMR RMHVYTPPGY EKGTTKYPVF
YLLHGAGDDD SGWNTIGRAG FIIDNLLAAG QAKPMIVVMP NGSMPLPPSS GMNAQAMNTI
RSMFANDFLN DVMPHVEKTY RTLPNRENRA LAGLSMGGFQ TLDVSLTRPE LFNYVGVFSS
GFFGASIDEA ETKYAKALND PSFNKNKKLF WIGIGKDDFV MDANKKTLAL LDKHQIKYQY
KETSGGHTWI NWRQYLNEYV PLLFK