Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1247 |
Symbol | |
ID | 8724980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1521245 |
End bp | 1522822 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | Mannitol dehydrogenase domain protein |
Protein accession | YP_003386096 |
Protein GI | 284036166 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0588834 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCT TATCGATAAC GACGCTCGCC ACGCATGCTT GCCCAACCGC CATCAGCCTG CCACCCGCCC ATGTTCAGCG ACTGCCCGAG CGGGTTTTGC AGTTCGGAAC GGGCGTTCTG TTGCGTGGCC TGCCCGATTA CCTGATTGAT CGAGCCAATC GGCAGGGTAT TTTCAATGGC CGTATCGTCG TTGTCAAATC AACCGATGGG GGCGATATGA CCGCGTTCGC CCGGCAGGAC AATTTGTATA CGCTCTGCAT CCGGGGCATC GAAAACGGGC AGACGGTCGA AGAAAATGTA ATCTGTTCGG CCATCAGCCG TGTGTTATCG GCGAAACAGC AATGGGATGA AATTTTACAC CTTGCCGCCA GCCCGGATTT GCAAATCGTG ATTTCAAACA CCACGGAAGT AGGTATTCAG CTAACTCAGG ACAGCATTCA GCTGTCGCCC CCGGACTCAT TTCCCGGTAA GTTACTGGCC GTCCTGTACG CCCGTTACAA AGCCTTTTCC GGCGACCTCA ATAAAGGATT AGTTATAGTT CCAACCGAAC TCATTCCCGA TAATGGGACG GCGCTGGCAG CTATTTTGCG TGAACTGGCA CACCGCAACG AACTCGGAAG TGAGTTCATT CACTGGCTTG AAACAGCCAA TACCTGCTGC AACTCGCTGG TCGACCGGAT CGTACCCGGA CACCCCGACG CAGCAACCCG GAAAGCGCTC ACCGAAGAGC TTGGCTACGA AGATGACCTG CTGACCATTT CGGAAGTGTA CCGATTATGG GCCATTGATG TGCCCGCCGG TTCTGACGAA GCGCATATCA AACATACGCT GTCCTTTCAT CAGGCCGACA GTTCCGTATT TATTCAGCCC GACATCGACC TCTTTCGGGA GTTGAAGTTG CGGCTGCTCA ATGGCACACA CACATTGAGT TGCGGGCTGG CCTTTCTGGG CGGCTTCACT ACCGTTCGCG AGGGAATGGA AGATGAGCAA TTGTCGGCTT TCGTTAGCCG GGTCATGCTA ACCGACCTCA TTCCGGGCAT TCCCTACCCG ATTGACGAGG CCGTAGCCCG GCGTTTCGGT ATGCAGGTTC TCGACCGCTT CCGCAACCCC TTTATCGAAC ATCGCTGGCT GGGCATCACC ATGCAATATT CGGCCAAAAT GAAGATGCGG ATTATTCCGG TTCTGCTCCA TCACTACGAA CAGGCCGACG CAACAACCCA ACCGGCCACT CCGCAGTATA TAGCGTTAGG CTTTGCGGCT TATCTGCTGT TCATGCGGGG CGTAACCCAA AAGGAGAACG TCTGGCAGGG CGAACGGGCT GGCGAAGCAT ACCCCATCAA CGATAGCCAG GCGGATTACT TCGCCGGATT ATGGGCCGGG TTATCGCCCG CAGCACTTGT CGATACAACC CTGAAAAACA CCGACCTGTG GGGGACCGAT CTGAGCCGTT TACCCGGTTT CGCCGAGGCT GTCAGCCATA ACCTGCTTCA ACTGCTCGAA CAGGGTGCTA CCGCAACCCT GGCGGCCCGG ATTGACGCGT ACGGAACGGT CGTAAGCGAG TCAATGGAAA CTCGTTGA
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Protein sequence | MSTLSITTLA THACPTAISL PPAHVQRLPE RVLQFGTGVL LRGLPDYLID RANRQGIFNG RIVVVKSTDG GDMTAFARQD NLYTLCIRGI ENGQTVEENV ICSAISRVLS AKQQWDEILH LAASPDLQIV ISNTTEVGIQ LTQDSIQLSP PDSFPGKLLA VLYARYKAFS GDLNKGLVIV PTELIPDNGT ALAAILRELA HRNELGSEFI HWLETANTCC NSLVDRIVPG HPDAATRKAL TEELGYEDDL LTISEVYRLW AIDVPAGSDE AHIKHTLSFH QADSSVFIQP DIDLFRELKL RLLNGTHTLS CGLAFLGGFT TVREGMEDEQ LSAFVSRVML TDLIPGIPYP IDEAVARRFG MQVLDRFRNP FIEHRWLGIT MQYSAKMKMR IIPVLLHHYE QADATTQPAT PQYIALGFAA YLLFMRGVTQ KENVWQGERA GEAYPINDSQ ADYFAGLWAG LSPAALVDTT LKNTDLWGTD LSRLPGFAEA VSHNLLQLLE QGATATLAAR IDAYGTVVSE SMETR
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