Gene Slin_1246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1246 
Symbol 
ID8724979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1519887 
End bp1520915 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content56% 
IMG OID 
ProductPfkB domain protein 
Protein accessionYP_003386095 
Protein GI284036165 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.463266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.070655 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAA TCTGTTGCTT CGGCGAATTA TTACTACGAT TTTCCCCCAT TGCCAACGGC 
GAATGGATTC GGCAAACGTC GATGCCCGTC TTTGTGGGTG GTGCCGAACT CAATGTAGCT
ACGGCCCTGG CAAAGTGGGA CGTTCCGGTT AAATACAGTA CGGTTCTTCC ACAAAATACC
CTGGCCGATG ACATTATACA CCATATCGAC GCGAAAGGCA TCGACTCGTC GGGCATTGTC
CGGTCCGGTC AACGAGTTGG CACGTATTAC CTGCCACAGG GCACCGATCT CAAAAATGCG
GGTGTTATCT ACGACCGGGC TCATTCAGCC TTTTCGGAGC TGGCTCCGGG CAAGGTAGAC
TGGGACGCTG TTTTACAGGA TACCGAGTGG CTGCACGTCA GCGCGATAAG TCCGGCGCTG
AGCGCCGACG TGGCCGAAGC CTGCCGGGAA CTGATGGCGG TGGCCTCGAC CAAAGGCATT
ACCGTTTCGA TGGACCTGAA TCATCGGGCG CGGCTCTGGC AGTACGGTGC CGATCCGGCA
GACATTATGC CCGGCCTTGT AGACTATTGC GATGTGGTGA TGGGCAACAT ATGGGCGGCC
AATGCGCTGC TGGGGATTCC CGTCGATGAG CATATTCATG CCAAAGGGCG CCCAACCGAC
TATCTGGCCC ATGCTCAGGC CACATCGGAA GCCATTCAGG GGCGGTTCCC CCGCGTTAAG
GTCGTGGCCA ACACCTTCCG GTTCGACACG CCCCCAACGG GTCTTCGGTA TTACACAACG
CTATTTACCG AAGGCCAGCA GTATGTTTCG CCCGAGTTGC TGACCGATTC GGTCGTTGAC
CGGGTAGGCA GTGGCGACTG CTTCATGGCG GGCTTGATTT ACGGCTTGTA CAAGCAACAT
GCACCGCAGG AGGTGGTCAA TTTTGCCGCT GCGGCTGCTT TCGGCAAATT GCAGGAACTG
GGCGATGCCA CCAACCAAAC CATTACCGAC ATCACAAATC GCTATTCTCC AATAACAGCT
TTACCCTAA
 
Protein sequence
MTKICCFGEL LLRFSPIANG EWIRQTSMPV FVGGAELNVA TALAKWDVPV KYSTVLPQNT 
LADDIIHHID AKGIDSSGIV RSGQRVGTYY LPQGTDLKNA GVIYDRAHSA FSELAPGKVD
WDAVLQDTEW LHVSAISPAL SADVAEACRE LMAVASTKGI TVSMDLNHRA RLWQYGADPA
DIMPGLVDYC DVVMGNIWAA NALLGIPVDE HIHAKGRPTD YLAHAQATSE AIQGRFPRVK
VVANTFRFDT PPTGLRYYTT LFTEGQQYVS PELLTDSVVD RVGSGDCFMA GLIYGLYKQH
APQEVVNFAA AAAFGKLQEL GDATNQTITD ITNRYSPITA LP