| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1232 |
|---|
| Symbol | |
|---|
| ID | 8724965 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 1504055 |
|---|
| End bp | 1504531 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | Endoribonuclease L-PSP |
|---|
| Protein accession | YP_003386081 |
|---|
| Protein GI | 284036151 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.118395 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCTG ACAGCCCTTC GCCCGAAAAA AACTTTGCTG ATACCGGTCT TACATTGCCC
CCTGCGCCAC AGCCGCTCGG CGTTTACAAG CCCTATCTGA TCGACGGTAA ATACCTGTAC
GTTTCCGGAC ATGGGCCGGT TCAGGATGAT AAGAGCCTGA TCATTGGCCG TATTGGCGAC
GATATGGATA TCGAACAGGG TAAACTGGCC GCCCGGCAGG TTGGGCTGAC TATTTTATCG
ACCATCCGCA CCAATCTGGG TAGCCTTGAT CGGGTAAAGC GCGTCATTAA AGTGCTTGGC
ATGGTCAACT GCACATCCGA TTTTGGCCGT CATCCCTATG TCATTAATGG ATGCAGCGAA
CTGTTCGCCA CCGTTTGGGG ATCTGATAAC GGCATCGGTG TACGGTCGGC GGTGGGTATG
GGCTCACTTC CCGATAATAT TCCGGTCGAA ATAGAAGCCT TATTCGAACT GGTCTGA
|
|---|
| Protein sequence | MQADSPSPEK NFADTGLTLP PAPQPLGVYK PYLIDGKYLY VSGHGPVQDD KSLIIGRIGD
DMDIEQGKLA ARQVGLTILS TIRTNLGSLD RVKRVIKVLG MVNCTSDFGR HPYVINGCSE
LFATVWGSDN GIGVRSAVGM GSLPDNIPVE IEALFELV
|
|---|
| |