| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1227 |
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| Symbol | |
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| ID | 8724960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 1497189 |
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| End bp | 1499960 |
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| Gene Length | 2772 bp |
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| Protein Length | 923 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003386076 |
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| Protein GI | 284036146 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.333141 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCAAC TTTACCGGAC AACGCTCCTT TTCATCGGAT TGCTTTGCTT CCTGACAACG
GCCTTTAGCC AGACTCCCAC CGATAAACCC ATTAGTGGCG ACTTCTCAAA TACCTCCTTT
ACCCAGTTTG TTCAGCAAGT TGAAGCACAG TCGCCTTACC GCTTCTTTTA CAATCCTACC
GATGCCGACA GTATCCGCAT TGATATACGG GTTGAGAAGC AGCCGCTGCG GTCTGTTCTT
CAGCAACTGT TCAACGGCAC CAAATATGGG TTTTCCATGG ATGAGCAACA GCGGGTTTAT
ATCACCACAA CCCGACCCAT CCGAACCGAA CTGCCCATTG GTTTCTTCGT ACGTGGGGGG
TCAGGTGCCG GAGCCGACTC AACCCTGGCG GGCTACCTGA CCGAAACTCA GAAAAAACAG
GTAGAACCGG AAACAAAGGT CTACGAAATT GGCAAACCGA CAACGCCCAT CCGGCCTGGG
CGGGCTACCC TGGCGGGGTA TGTCCGTAAC GTATCATCGG GCGAACCCAT AGTGGGCGCT
GCCGTTTATC TGGACAACCC ACGCGTTGGC ACCATCTCCG ATCAGTTTGG TTATTATTCA
ATTACCCTGC CGCGTGGTAA ACATGACCTG AAGCTGCGGA GTATTGGCCT GAAAGATACC
CGACGCCGGA TTATTCTCTA TGCCGATGGC AAGTTCGACA TCGAGATGGA AGACGATGTC
ATTGCCCTGA AAGAGGTAGT GATCGAAGCC GAAAAAGACA AGAATATTTC GGGTCTTCAA
ATGGGTCAGG AGCGGGTCGA TATTAAAAGC ATCAAGCAGG TGCCTACGGC GCTGGGCGAG
GCCGATTTGT TACGGGTTAT CCAGACCTTG CCGGGGGTAA AAACCGTGGG TGAAAGCTCA
ACCGGACTCA ACGTGCGTGG AGGTGCTACG GATCAGAACC TGATTCTGTA TAACGACGCC
ACGATTTATA ACTCGTCGCA CCTGTTCGGT TTTTTCTCGG CCTTTAACCC CGACATGATC
AAAAGCGCCG AACTCTACAA AAGTGCTATT CCATCGCGCT TTGGGGGGCG GCTGTCGTCG
GTACTGGATG TACAGACGCG GGATGGCAAC AAAAAGAAGT TTGTCGGCTC GGGCGGGATT
GGGCTGCTCA CCGGCCGTTT AACGCTGGAA GGACCGATCT TTAAAGACAA AACCTCGTTT
ATTGCCGGTA TCCGCTCGTC GTACTCCGAC TGGTTGCTGA GACAGCTCCA GAATGCGTCG
TTCCAGAAAA GTCAGGCGCA GTTCTACGAC ATCAACCTGC ACATCACCCA CGAAGCCAAC
GAAAAAAACA CCCTGTACCT GACCGGTTAC ATGAGCCGCG ACCAGTTCAA GCTCAACAGC
GATACGTCGT ACCGGTATCA GAACCAGACA GCAACGCTAA AATGGAAGCA CGTCTTTAAT
AACAAACTGT ACAGCGTTTT TACGGGTAAT TACAGCGGCT ACGAGTATGA CGTGGCGAGT
GAAAAAAATC CGGTGAACGC CTACCAGCTC GACTTCGCCA TCAAACAATC GCAGATAAAG
GCTGATTTCA ACTATTACCC AACCAACCAG CACGCGGTTG ATTTTGGCAT CAGCAGTACT
CATTACCGAA TCTCGCCGGG CAATTTTCAG CCCAAAGGGC GTGAGTCGCT GATTTTGCCC
GATGTTGTGC CCACGGAGCA GGCACTGGAA AGTGCGGTGT ACATTGGCGA CCGATTCGAC
ATCAGCCCCC GACTGTCGAT TAGTGGCGGG TTGCGTTATT CGATCTACAC CTATCTGGGC
CCCAATTCGG TTTATCAGTA CGCAGCAGGC CTACCCAAGT CGGTGAACAC CATCATTGAC
ACCCTTGCTT ACGGTGCCAA CAAAGCCATT TCGACCTATC AGGGGCCGGA GTACCGGCTG
GCCATCCGCT ATGCGCTCTC CAACACGGCT TCGGTGAAAG CCAGTTTCAA CCGGACCCGG
CAGTACATTC AGATGCTTTC CAACACGACG GTCATCTCCC CCACCGATAT CTGGAAGCTC
AGCGACCCGA ACATCAAACC GCAGGTTGGC GACCAGTATG CCGTGGGTAT TTACAAAAAC
AACCGGACCA ATACCATTGA GCTATCCGCA GAGGCTTATT ACAAAACCAT GCAGAATCTG
CTCGATTACC GGGGCGGGGC TTCGCTGATT TTGAACCACC ATATCGAAAC CGATGTGGTG
CGGGCAGAAG GCATGGCCTA TGGCATCGAA CTGCTGGCAA AAAAAATGAC GGGCAAGTTG
AACGGCTGGA TAAGTTACAC CTACGCCCGA ACCCTCCTGC GCACCAACGG GCTGAACAGC
AGCGAAACCA TCAACCAGGG CAATTTCTAC CCGAGCAGCT ACGACAAACC GCATGATTTC
ACGATGATCA GCAATTACAA GATTAACCGT CGATTTAGTC TGTCGTTGAA TTTTACCTAT
AGCACGGGGC GACCCATTAC GCTGCCGGTG GGCAAATACA CCCTCGACAA TGCCGCCCGA
CTGCTGTATT CGGAGCGCAA CCAGTACCGG ATTCCGGATT ACTACCGCGC AGACTTTGCT
ATGAATATTG AAGGCAACCA CAAGGTAAAA AAGCTCGCGC ATAGCTCCTG GACGATCTCC
GTATACAATC TACTGGGTCG GCATAACGCG TATTCGGTGT ATTTTAAATC GGAAAATGGC
CGGATCAATG GGTATCAGCT ATCCATTTTC GGCAATCCGA TTCCGTCAAT TACGTATAAT
TTCAGATTTT AA
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| Protein sequence | MIQLYRTTLL FIGLLCFLTT AFSQTPTDKP ISGDFSNTSF TQFVQQVEAQ SPYRFFYNPT
DADSIRIDIR VEKQPLRSVL QQLFNGTKYG FSMDEQQRVY ITTTRPIRTE LPIGFFVRGG
SGAGADSTLA GYLTETQKKQ VEPETKVYEI GKPTTPIRPG RATLAGYVRN VSSGEPIVGA
AVYLDNPRVG TISDQFGYYS ITLPRGKHDL KLRSIGLKDT RRRIILYADG KFDIEMEDDV
IALKEVVIEA EKDKNISGLQ MGQERVDIKS IKQVPTALGE ADLLRVIQTL PGVKTVGESS
TGLNVRGGAT DQNLILYNDA TIYNSSHLFG FFSAFNPDMI KSAELYKSAI PSRFGGRLSS
VLDVQTRDGN KKKFVGSGGI GLLTGRLTLE GPIFKDKTSF IAGIRSSYSD WLLRQLQNAS
FQKSQAQFYD INLHITHEAN EKNTLYLTGY MSRDQFKLNS DTSYRYQNQT ATLKWKHVFN
NKLYSVFTGN YSGYEYDVAS EKNPVNAYQL DFAIKQSQIK ADFNYYPTNQ HAVDFGISST
HYRISPGNFQ PKGRESLILP DVVPTEQALE SAVYIGDRFD ISPRLSISGG LRYSIYTYLG
PNSVYQYAAG LPKSVNTIID TLAYGANKAI STYQGPEYRL AIRYALSNTA SVKASFNRTR
QYIQMLSNTT VISPTDIWKL SDPNIKPQVG DQYAVGIYKN NRTNTIELSA EAYYKTMQNL
LDYRGGASLI LNHHIETDVV RAEGMAYGIE LLAKKMTGKL NGWISYTYAR TLLRTNGLNS
SETINQGNFY PSSYDKPHDF TMISNYKINR RFSLSLNFTY STGRPITLPV GKYTLDNAAR
LLYSERNQYR IPDYYRADFA MNIEGNHKVK KLAHSSWTIS VYNLLGRHNA YSVYFKSENG
RINGYQLSIF GNPIPSITYN FRF
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