Gene Slin_1213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1213 
Symbol 
ID8724946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1472429 
End bp1472941 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content45% 
IMG OID 
Productprotein of unknown function DUF150 
Protein accessionYP_003386062 
Protein GI284036132 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGACA AAGCAAAAAT TACCGAACTA CTACAGCCCT ACCTGAAAAA CGATTTATTT 
TATATCGTTG ATATTCAGGT AGCTGGAAGG CAAGGTGGCC GACTGAAGGT CACTATTTTG
TTGGACAGCG ATGCGGGTAT TACGATTGAT GACTGTGCCG ATATTAGCCG TAGGCTAGGA
GGACAGATGG ACGAAATGAA TTTTTTCGGA GATTCGCCAT TCACGCTGGA GATTTCATCC
CCCGGCGTTG ATTATCCGTT GACTTTTTCG CGTCAGTTTG TCCGCAATGT GGGCCGTCAA
TTGATTGTGA CGCTCACCGA TGGAGTTATC CGTAAAGGGG TACTCGAATC GGTAGCCGAA
GATCATATTG TTCTGGATAT AGAAGCAGAA AAAAAGTCGA AGAGTAAAAA GAAAAAGGAT
GCCGACGTAT CTCCCGACCT CCAACCGGTT GGCCCAACGC CAATCTTGTT CGGGCAGATA
AAAAAAGCGC AAGTAGAAGT ATCATTTAAA TAA
 
Protein sequence
MDDKAKITEL LQPYLKNDLF YIVDIQVAGR QGGRLKVTIL LDSDAGITID DCADISRRLG 
GQMDEMNFFG DSPFTLEISS PGVDYPLTFS RQFVRNVGRQ LIVTLTDGVI RKGVLESVAE
DHIVLDIEAE KKSKSKKKKD ADVSPDLQPV GPTPILFGQI KKAQVEVSFK