Gene Slin_1208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1208 
Symbol 
ID8724941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1468191 
End bp1468778 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content48% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003386058 
Protein GI284036128 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGAAA GCAGGTCACC CATATTAACT GATGAAGAGT TGCTGATGGG GTTGGCCGAG 
GGCACCGATG ACGCATTGAC GCATTTGTAT CGACGGTATT TCCCAATGGT ACTCCACTTC
GTAACCACAA ACAGTGGTAG TGAAGATGAC GCCAAGGATA TATACCAGGA AGCACTGATC
GTATTGTATG AGAAGGTGAG GAGTGGTTCG CTGGAATTAC ATTGCCAGCT CAAAACATAC
CTCTATTCCG TTGGTCGCCG ATTATGGTTA AAGCAGTTAG CCCAGCGAAG CCGATTCATG
GTACGCGATG TAGAAACGCC CGCTTCAGAC GAGTTTGTTG CCGGGCAGAT TGAAGAGGAC
TTATCGGAAC ACGAAGAACG TGACCGGCAA TTCGATTTGA TGGCTGATTC GCTTACCCGA
CTCGGTGAAC CCTGCCGAAC CCTGCTGGAC GATTTTTACA TTCAGCACCT GAGCATGCAG
GAGATTACTG AAAAGTTTGG CTATACCAAT ACCGACAACG CCAAGACGCA GAAATACAAA
TGCCTGATGC GGCTAAAGCG TTTGTTCTTT TCAGAATATA AAGCGTAA
 
Protein sequence
MKESRSPILT DEELLMGLAE GTDDALTHLY RRYFPMVLHF VTTNSGSEDD AKDIYQEALI 
VLYEKVRSGS LELHCQLKTY LYSVGRRLWL KQLAQRSRFM VRDVETPASD EFVAGQIEED
LSEHEERDRQ FDLMADSLTR LGEPCRTLLD DFYIQHLSMQ EITEKFGYTN TDNAKTQKYK
CLMRLKRLFF SEYKA