| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1187 |
|---|
| Symbol | |
|---|
| ID | 8724920 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 1446662 |
|---|
| End bp | 1447348 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF1361 |
|---|
| Protein accession | YP_003386037 |
|---|
| Protein GI | 284036107 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAGA CTCACTTCTC TGGCAACCGC TCGGGCAAAA GCCTCCAGGC TCTGTTATTA
CTTACACTCA CGGGGCTGAT TCTGGTCACC ACCCGAGGCT TATTGACCGG CAACTGGTGG
TTTTTTGTCA TGCTTATATG GAACCTGATT CTGGCCTGGT TCCCACTGGG TGTGGTGCTG
GTTCTCCGTG ACTTGCGAAC AGCAGGTTTC CGAAATCAGT GGTTACTGGC GGCTGGACTG
GCTGGCTGGC TGGCATTTTT ACCCAATGCT CCTTATATCA TTACCGACCT GTTCCATATT
CGCAACGTCG AACAGCCTTT GCTTTGGTTC GATACAATGA CGCTCTTTAT CTTTGCCTTA
ACAGGCTTAC TGACAGGACT TTACTCCATT CTAATCGTTC ACCGAATGCT CCGACCGCTC
ACCGGAGTTT TAAGAGCCTG GGTATTTATA ATGGGCAGTC AGGTTTTGTC TGGTTTTGGT
ATTTACCTGG GCCGGGTTGG CCGGTGGAAC AGCTGGAACG TTTTAACGAC TCCATCCGAA
TTGACCAGGG CCATTGTCCA TGCCTATCAT GATCATCTGA GTATAAAATT AACTATTGCC
TACGGCTTCG TTCTGTTTAT TGTTTACGTA GCCTTTTATT GGTATACCGA CCATGAGAGC
AAGACAAGCC CTACCTTTGT CAAATGA
|
|---|
| Protein sequence | MNQTHFSGNR SGKSLQALLL LTLTGLILVT TRGLLTGNWW FFVMLIWNLI LAWFPLGVVL
VLRDLRTAGF RNQWLLAAGL AGWLAFLPNA PYIITDLFHI RNVEQPLLWF DTMTLFIFAL
TGLLTGLYSI LIVHRMLRPL TGVLRAWVFI MGSQVLSGFG IYLGRVGRWN SWNVLTTPSE
LTRAIVHAYH DHLSIKLTIA YGFVLFIVYV AFYWYTDHES KTSPTFVK
|
|---|
| |