Gene Slin_1183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1183 
Symbol 
ID8724916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1444531 
End bp1445241 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content48% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003386033 
Protein GI284036103 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC TAGTACTAAT CGCTGGCCTG GCAGCCTTAT CCTGGCAATC CGTAATTGCT 
CAGACAACAC CAACAGCCGA CGAAGTGGTC GATAAATACA TTGCGGCTAT TGGAGGGAAG
GATGCGCTTA TGAAAGTGAC CGACATGACG ACCAGCATGT CCAGCGAAGG GCAGATGGGT
GCTATTATGA TAACGCGCAA GCAGAAACTG CCTAACCTGT TTTCAATGGT AATCAACGCC
AATGGTATGG AGGTAATGAA ACAAACTGGC GACGGAACCA AGATTGCCAT GGGAGGTATG
CAGGGCAGCC GTACCATTGA CGGGGCCGCA GCCAAGCAGA TGACCGTTAT GAATGTGCTC
TTTCCGGAAC TTCATTATGC CGAAAACGGG GTGAAAACAA CCCTTATGGG TACGGAGAAA
GTAGATGGCA AAGACACTTA CAAGCTTAGC CATACTACAG AGGATGGAGC TACAACCTGG
ACTGACAATT TCGACATCAC GACCGGGCTG AAAGTGCAGG CCATCACAAC GGCAAAGTCG
CCCCAGGGTG AAATGAAGTC GACCATGAGC TACAGTGACT ACAAAGACGT AAATGGTATT
AAAATTCCGA TGACCATTCT CCAGCAGTCG CCCAGAGGGC CAATGACCAT GACGGTCGAT
AACGTCAAGA TCAACAAAGG CCTGAAAGAT TCCGATTTTA CGATAAAATA G
 
Protein sequence
MKKLVLIAGL AALSWQSVIA QTTPTADEVV DKYIAAIGGK DALMKVTDMT TSMSSEGQMG 
AIMITRKQKL PNLFSMVINA NGMEVMKQTG DGTKIAMGGM QGSRTIDGAA AKQMTVMNVL
FPELHYAENG VKTTLMGTEK VDGKDTYKLS HTTEDGATTW TDNFDITTGL KVQAITTAKS
PQGEMKSTMS YSDYKDVNGI KIPMTILQQS PRGPMTMTVD NVKINKGLKD SDFTIK