Gene Slin_1182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1182 
Symbol 
ID8724915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1443155 
End bp1444450 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content52% 
IMG OID 
ProductCitrate transporter 
Protein accessionYP_003386032 
Protein GI284036102 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCTAT TACTCGCTCT TCTCTTCATA ATCGGGTATG TTCTGATCAC CCTTGAACAC 
CCAATAAAAG TTAACAAAAC CGCAACCGCG CTGATTACGG GCGTTGCCTG CTGGGTCGCC
TATGCCTTGC TGAATACAGA GATCGACCTT GTTGGTGAGC AGCTAAAGCA CCATCTGGCC
GATACGGCCG AAATCTTGTT CTTCCTGATG GGGGCCATGA CGGTGGTCGA ATTGATTGAT
GTGCATGATG GCTTCACCCT CATAACTGAT CGCATCGCCA GTCGCAACAT GCGAACGCTG
CTCTGGATCA TCAGTATCCT GGCCTTTTTC ATGTCGGCTT TGCTGGATAA CCTCACCACG
TCTATCGTCA TGGTATCGGT TGTTCGCAAG CTTATCAAAA ATGCCGAAGA CCGGCGTATC
ATGGCAGGTA TGATTATCAT TGCGGCCAAT GCCGGTGGTG CCTGGTCGCC CATTGGCGAC
GTGACAACAA CGATGCTCTG GATTGGTGGG CATATAACCT CGTTCCATAT TATCCGTTCA
ATGCTGTTAC CGAGTCTGGT TTCGCTGCTG GTTCCACTAG CCCTGCTGAC CCGACTCTAC
AAACCCTCAC CAGAAAATAA ACCGGCACGG GAGCAGGCTG GTATCAGCCG TCCGTATGTG
ACACCTACTG CCCGACGCGA ACGCCGGACT ATGCTGGCCA TTGGGCTGGG AGGCATGGTG
TTCGTTCCTA TTTTCAAAAC GGTCACCCAT TTGCCGCCGT ATATGGGCAT GATGTTGGTG
CTGGGAATTA TCTGGGTAGC TTCCGAAATA CTCCACAGTG AGAAAGATGA AGCCGAACGC
AAGAAATTCA CGGCCGCCTA TGCGCTCAGC CGAATCGACA CATCCAGCAT TCTTTTCTTT
CTGGGTATCC TGCTGGCCGT GGGCTCACTG GAAGCAACGG GTATATTGAG GTCGCTGGCA
GCTTCGCTGA GCCAGTCGGT TGGCAATGTA GATGTGATAA TCTTCTTAAT CGGAGCCGTA
TCGGCGGTAG TCGACAATGT CCCTATCGTG GCCGCTACTA TGGGAATGTT CGATATGCAG
AGCTATCCGG TCGATGCCAA ATTATGGACA TTCCTGGCGT ATTGTGGCGG TACAGGCGGA
AGTTTGCTCG TTATTGGGTC CGCTGCGGGT GTAGCCGTTA TGGGCATGGA AAAACTGGCT
TTTGGCTGGT ATCTGCGTAA AATAAGCTGG CTGGCGCTAA TTGGTTATAT AGCTGGCGCA
CTGGTTTATC TGGCTGGTTT TGCCCTGCTA GCGTAA
 
Protein sequence
MTLLLALLFI IGYVLITLEH PIKVNKTATA LITGVACWVA YALLNTEIDL VGEQLKHHLA 
DTAEILFFLM GAMTVVELID VHDGFTLITD RIASRNMRTL LWIISILAFF MSALLDNLTT
SIVMVSVVRK LIKNAEDRRI MAGMIIIAAN AGGAWSPIGD VTTTMLWIGG HITSFHIIRS
MLLPSLVSLL VPLALLTRLY KPSPENKPAR EQAGISRPYV TPTARRERRT MLAIGLGGMV
FVPIFKTVTH LPPYMGMMLV LGIIWVASEI LHSEKDEAER KKFTAAYALS RIDTSSILFF
LGILLAVGSL EATGILRSLA ASLSQSVGNV DVIIFLIGAV SAVVDNVPIV AATMGMFDMQ
SYPVDAKLWT FLAYCGGTGG SLLVIGSAAG VAVMGMEKLA FGWYLRKISW LALIGYIAGA
LVYLAGFALL A