| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1179 |
|---|
| Symbol | |
|---|
| ID | 8724912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 1440585 |
|---|
| End bp | 1441478 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | putative lipoprotein |
|---|
| Protein accession | YP_003386029 |
|---|
| Protein GI | 284036099 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTAATT TCACTTTGCT GGTTTTAGGG CTGGCGTTCA CTGCGTGTAA ACTCAATGTA
CCCAGTGTAT ATGATGTAAA TTTTACATCA GATCCAACAG TAGCCCCCGT TGCACCAGGT
CAAATTGATG AAGCTTCCGG AATGGTTGAT AGCCGAAGTC AGCCGGGTAA TATCTGGATT
GAACAGGACA GCGGCAGCCC CGCCGAACTG GCCCTGTTAG GGTACGACGG GACCGTTAAA
GGGAAAATTT CCGTGCCATC CATCCAGAAT CGGGATTGGG AGGAACTGTC TGTTGGACCA
GGGCCGAAGG ATGGTACGAA CTACCTGTAT ATAGGCGACA TTGGCGACAA CAATGCCCAG
TACGAAACCT GCCAGATTTA CCGTATACCT GAGCCCGCAA ACCTACAGTC GCCTATTGCT
GTTAGTGACA TCGGCCGTAT CGACTTCCGC TACCCGCTGG GACCACGTGA TGCGGAAGCT
ATGTTTGTTG ACCCGCAAAC CAAAGACATA TACATCATCT CCAAACGGGA AGAAAAAGTA
CATCTGTACG GACTGGCCTA CCCACAAAGT ACCAACAGCT TAATTACAGC GCAGGATTTT
GGCGAGCTGC CTTCTTTTGG CGGTGGTTTG CCGAACTACG TAACCGGTGC ATCCATTTCG
CCCGATGGCC GCGAAATTCT GCTCAGAACA TACACTTCCA TGTATTACTG GAAGCGGGAT
GCCGGGCAAA GCATTGCCGA TGCTATGCAG TACGGCACCC GGCGCTCATT GGCTATTCGT
CTGGAGCCGC AGGGCGAAGC CGTTTGTTTC GACAAAGACG CCAAAGGCTT CTTCACCATT
AGTGAAAAAG CAAATGCAGC CTCAGTGAAC TTATATTACT ATGCTAAAAA ATAG
|
|---|
| Protein sequence | MRNFTLLVLG LAFTACKLNV PSVYDVNFTS DPTVAPVAPG QIDEASGMVD SRSQPGNIWI
EQDSGSPAEL ALLGYDGTVK GKISVPSIQN RDWEELSVGP GPKDGTNYLY IGDIGDNNAQ
YETCQIYRIP EPANLQSPIA VSDIGRIDFR YPLGPRDAEA MFVDPQTKDI YIISKREEKV
HLYGLAYPQS TNSLITAQDF GELPSFGGGL PNYVTGASIS PDGREILLRT YTSMYYWKRD
AGQSIADAMQ YGTRRSLAIR LEPQGEAVCF DKDAKGFFTI SEKANAASVN LYYYAKK
|
|---|
| |