Gene Slin_1115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1115 
Symbol 
ID8724848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1363762 
End bp1364712 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content46% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003385965 
Protein GI284036035 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0415846 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.958159 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCAA TGGAACCTAG ACCACAACCC CGGAATAACA GTCGTAGTTA CTTATTGGCG 
GCTTTACTGA TTCTGGCCGC CCTTAACGTA CTACTGCTTT ATTTCTATTA TCAGGAGCGG
CAGGACAACA AGACAAAAGA CGCAACCATT GCAGCAAAAA CAGAAGAGGT ACTTATTGCT
AAAACAAAAC TTGATTCGAT TTCAACTCAA TTAGATGAGA AAATTGCTGA AATCCGGCAA
TTAGGCGGCA ATATCGATTC ATTAATGAAG ATAAAGGCCC AGCTTGAGGT CGATAAGCGT
GAACTCAAGA ATGTGGGTTC GTTCGACAGT AAGAAGTATG ATCAGAAGAT TCGCAATTAT
CAATCTTTAC TGGCGCAGAA AGACCAGGAA ATTGCCCGAT TGAAAGAAGA AAACGGCGTT
CTGGCACAAC AGAATCAAAC CCTTGCTCAG GAAAACAGTG GCTTAAAATC TGAGAAGCAA
AGCCTGAGCG ACTCGGTCGT ATCGGTCACG ATTAAAAATC AGGAGCTGGC GGAGAAAGTA
ACCATTGCAG CCGCCCTAAG GGCTGAAACC GTAACGGTAA CGGGTGTCAA TGCCAAAGGA
AAAGAAACCG ACGGAGGGGA ATACAAAGCA AAGCGCACTG ATAAGGTGCA CATCTCAATG
CAGCTTTCGC CAAACGGACT AGCCAAAAAG GACGAGAAAC TGCTTTATAT CCGGATCATT
GACCCAAATG GCGCTGTTGT TTCCGATCTG GCCACCGGCT CGGGTGAGTT TATGTATAAC
AACCAGGGAA TGATTTACAC GGCCATGCAG AAGTTTACTT TCGATAATAC CCGGCAGCGG
CTCGATTTCT ACTATGGCCG GGGTGGTCAG CGTTTTATTG AGGGCAAACA CACCGTTGAG
GTCTATTGCG AAGGGTTCCG GATTGGTGAT GGTGAGTTTA CTATAAAATA G
 
Protein sequence
MNPMEPRPQP RNNSRSYLLA ALLILAALNV LLLYFYYQER QDNKTKDATI AAKTEEVLIA 
KTKLDSISTQ LDEKIAEIRQ LGGNIDSLMK IKAQLEVDKR ELKNVGSFDS KKYDQKIRNY
QSLLAQKDQE IARLKEENGV LAQQNQTLAQ ENSGLKSEKQ SLSDSVVSVT IKNQELAEKV
TIAAALRAET VTVTGVNAKG KETDGGEYKA KRTDKVHISM QLSPNGLAKK DEKLLYIRII
DPNGAVVSDL ATGSGEFMYN NQGMIYTAMQ KFTFDNTRQR LDFYYGRGGQ RFIEGKHTVE
VYCEGFRIGD GEFTIK