Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1115 |
Symbol | |
ID | 8724848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1363762 |
End bp | 1364712 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003385965 |
Protein GI | 284036035 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0415846 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.958159 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCCAA TGGAACCTAG ACCACAACCC CGGAATAACA GTCGTAGTTA CTTATTGGCG GCTTTACTGA TTCTGGCCGC CCTTAACGTA CTACTGCTTT ATTTCTATTA TCAGGAGCGG CAGGACAACA AGACAAAAGA CGCAACCATT GCAGCAAAAA CAGAAGAGGT ACTTATTGCT AAAACAAAAC TTGATTCGAT TTCAACTCAA TTAGATGAGA AAATTGCTGA AATCCGGCAA TTAGGCGGCA ATATCGATTC ATTAATGAAG ATAAAGGCCC AGCTTGAGGT CGATAAGCGT GAACTCAAGA ATGTGGGTTC GTTCGACAGT AAGAAGTATG ATCAGAAGAT TCGCAATTAT CAATCTTTAC TGGCGCAGAA AGACCAGGAA ATTGCCCGAT TGAAAGAAGA AAACGGCGTT CTGGCACAAC AGAATCAAAC CCTTGCTCAG GAAAACAGTG GCTTAAAATC TGAGAAGCAA AGCCTGAGCG ACTCGGTCGT ATCGGTCACG ATTAAAAATC AGGAGCTGGC GGAGAAAGTA ACCATTGCAG CCGCCCTAAG GGCTGAAACC GTAACGGTAA CGGGTGTCAA TGCCAAAGGA AAAGAAACCG ACGGAGGGGA ATACAAAGCA AAGCGCACTG ATAAGGTGCA CATCTCAATG CAGCTTTCGC CAAACGGACT AGCCAAAAAG GACGAGAAAC TGCTTTATAT CCGGATCATT GACCCAAATG GCGCTGTTGT TTCCGATCTG GCCACCGGCT CGGGTGAGTT TATGTATAAC AACCAGGGAA TGATTTACAC GGCCATGCAG AAGTTTACTT TCGATAATAC CCGGCAGCGG CTCGATTTCT ACTATGGCCG GGGTGGTCAG CGTTTTATTG AGGGCAAACA CACCGTTGAG GTCTATTGCG AAGGGTTCCG GATTGGTGAT GGTGAGTTTA CTATAAAATA G
|
Protein sequence | MNPMEPRPQP RNNSRSYLLA ALLILAALNV LLLYFYYQER QDNKTKDATI AAKTEEVLIA KTKLDSISTQ LDEKIAEIRQ LGGNIDSLMK IKAQLEVDKR ELKNVGSFDS KKYDQKIRNY QSLLAQKDQE IARLKEENGV LAQQNQTLAQ ENSGLKSEKQ SLSDSVVSVT IKNQELAEKV TIAAALRAET VTVTGVNAKG KETDGGEYKA KRTDKVHISM QLSPNGLAKK DEKLLYIRII DPNGAVVSDL ATGSGEFMYN NQGMIYTAMQ KFTFDNTRQR LDFYYGRGGQ RFIEGKHTVE VYCEGFRIGD GEFTIK
|
| |