Gene Slin_1066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1066 
Symbol 
ID8724796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1301941 
End bp1303104 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content56% 
IMG OID 
Productradical SAM domain-containing protein 
Protein accessionYP_003385916 
Protein GI284035986 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.504445 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACCTG AGCTAACTGC AACACCCGTA CAAAAATCAA CTCCTGAACC GCTGACAAAA 
TCGGCCCGGC TATGGATGCC GAAGCGGGTT ATTTTCACCG CCGACGCCCT TAACGAACCC
TTTGGCCAGG CGATGTACGA GCGTATTTCA GCGCTTGATC TGCCCATTGA AATTTCCAAA
AATAACCGCA TTACAGGCTT GCGGGGTGCC GACGAACGTG AGACGTACCG AAATGCCAAG
AACACACTGG CCATCGTCAA TGCTCCTCCC GGCGCCTTCA AGCTCCAGCC CATTCCTCCC
TCCGCAGATT GGCAGATGAA TCTGGCCGAA GGTTGTCCGG CGCATTGCCA GTATTGTTAT
CTGGCCGGTA GCCTGTCCGG GCCGCCGGTT GTGCGGGCCT ACGCTAACCT CCCTAAAATG
CTTGCCCATA CGGCCACCTA CGAGGGCACC TACCCCCCCA ATCGAACCTG GCAGGGGTCT
ACCACCGGTC AGGATGGTGC GAATCGCCCT ACAACCTTCG AGGTGAGTTG CTATACCGAT
GTTTTGGGGA TCGAGCACCT GACGGGAAGC ATGGCGGAGT GCATCCGGTA TTACGGCACG
CGGGAGATGG CGGAATTGCG TTTTGTAACG AAATACGACC AGGTTGATAG TCTACTGAAC
CTGCCACACA ACGGCCACAC CCGCGCCCGG GTCAGCCTCA ACGCCGACGC AATTGCCCGT
CGTCTCGAAG GCGGCACAGC TTCTGTTGAA GCCCGGCTGC AGGGTATTCG CAAGCTGGCG
ATGTCGAAAG AACTGGGTGG TGGTGGCTAC CCCATTGGGT TGGTCATTGC GCCCATCATG
CCCATTCCCG CCTGGCGCGA ACACTACACC GCTCTACTCG ACCGCATGGC CGAAGTCCTG
GACTTTGCGC AGGGTGGCGA AGCGGTCGAT ATGAATGTCG AGTTCATCAG CCATCGCTTC
ACTCCCGGCT CTAAAGACAT TTTGTTGCAG TGGTATCCGA ATACCTCGCT CGATATGGAT
GAAGCAACGC GTTCGGAAAA GCGTAACAAA TTCGGGGGCA CCAAGTACGT GTACCGGCCC
GACGAGATGA GGGAAATGAA AGCCTTTTTC TATGCCGAAT GGACGAAGCG TTTCCCCAAG
GCCCCAATTC TGTACTGGAC CTGA
 
Protein sequence
MIPELTATPV QKSTPEPLTK SARLWMPKRV IFTADALNEP FGQAMYERIS ALDLPIEISK 
NNRITGLRGA DERETYRNAK NTLAIVNAPP GAFKLQPIPP SADWQMNLAE GCPAHCQYCY
LAGSLSGPPV VRAYANLPKM LAHTATYEGT YPPNRTWQGS TTGQDGANRP TTFEVSCYTD
VLGIEHLTGS MAECIRYYGT REMAELRFVT KYDQVDSLLN LPHNGHTRAR VSLNADAIAR
RLEGGTASVE ARLQGIRKLA MSKELGGGGY PIGLVIAPIM PIPAWREHYT ALLDRMAEVL
DFAQGGEAVD MNVEFISHRF TPGSKDILLQ WYPNTSLDMD EATRSEKRNK FGGTKYVYRP
DEMREMKAFF YAEWTKRFPK APILYWT