Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1058 |
Symbol | |
ID | 8724788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1292242 |
End bp | 1293591 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003385908 |
Protein GI | 284035978 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.494018 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.557281 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAACCC CTTCCGGCCG CTTTCGCTGG CGTATTGTAG CTTTATTGTT TCTGGCAACG ACGATCAATT ACATTGATCG GCAAGTGTTG TCTTTTACTA TGACGGACGA AGTCTTTCGG AAGGAAATGC TGGATATTGC GCCTGACACC GTCCTCACGA AAGAAGCAAA CGACCGGTTT AAAGTGCTCT ATGGAGATGT TGATGCCGCT TTCAAATTCG CTTACGCCAT TGGTTTTCTG CTGGCTGGCT GGCTTGTTGA CCGCATTGGT ACGAAACGGG GGTTTTCGTT AGGGATTCTG GTCTGGAGCG TTGCCGGTGT TCTTACGGCT TCGGTCAATA CCATTGCGGG ATTGAGCTGG ATGCGAGCAT TACTGGGGCT GGGTGAATCG GCGAATTTTC CTTCAGCCAT AAAAACCATT GCCGAGTGGT TTCCCCGACG CGAACGCTCT TTTGCCAATG GTCTCTTCAA TGCAGGCACT AATGTGGGCA TTATTCTAAC GGCCCTCGCC GTTCCTTACC TTATTTTGCA GTTTGGCTGG CGTAGTTCTT TTTTAGTAAC GGGCGTTCTG GGCTTTGGCT TACTGATATT CTGGTGGTTG CTATACAGTA AACCCGAACG GCACCCGAAA CTCTCCGCCG AAGAGCTGGC TTATATCCGG GCAGATGCCG AGAAAACCCC GCCCCTCAAA GTCTCCTGGA GTCGCTTGCT GAGCTACAAA CAAACCTGGG CTTTTGCCGT CGGAAAACTC ATGTCCGACC CCATCTGGTG GTTCTATATG TCATGGTTAC CCGATTTTTT CAACTCGAAC GATGCTCTTG ATGAGCGACT GGACCTCAAA AGCTTCGGGC TCCCCTTTCT GATCATTTAC GTCGTTTCCG ACGCGGGCAG CATTTTCTTC GGCTGGTTAA GTACCCAGTT CATGCGTTGG GGTTGGTCGG CAAATCGGGC CCGTAAAACG ACATTACTGA TTTGTGCGCT GTGCGTTGTC CCAATTTTCT TTGCCGCACA AACCAACAGC CTGACTATTG CGATTGCCCT CATTGCGCTG GCAACGGCCG CTCATCAGGG TTGGTCGGCA AATATGTATA CCTTCGCGTC GGATTTATTT CCCAGGAATG TAGTAGCGTC TGTAACTGGC ATTGGCGGTA TGTTCGGAAC AGTTGGCGGT ATTCTGCTGG CGCTGCTGGC CGGACGAATC ATTACCGCTT TCGGCTATCT GCCCATGTTC ATTGTGGCAA GCTGCTCATA TCTGATCGCA CTTATACTTA TTCATCTGAT TTTACCCAAA TTAGAGCCCG TAAAAACCGA GGAATTAATG GGCGACTATA TGGTAGACAG TAAGCAGTAG
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Protein sequence | MPTPSGRFRW RIVALLFLAT TINYIDRQVL SFTMTDEVFR KEMLDIAPDT VLTKEANDRF KVLYGDVDAA FKFAYAIGFL LAGWLVDRIG TKRGFSLGIL VWSVAGVLTA SVNTIAGLSW MRALLGLGES ANFPSAIKTI AEWFPRRERS FANGLFNAGT NVGIILTALA VPYLILQFGW RSSFLVTGVL GFGLLIFWWL LYSKPERHPK LSAEELAYIR ADAEKTPPLK VSWSRLLSYK QTWAFAVGKL MSDPIWWFYM SWLPDFFNSN DALDERLDLK SFGLPFLIIY VVSDAGSIFF GWLSTQFMRW GWSANRARKT TLLICALCVV PIFFAAQTNS LTIAIALIAL ATAAHQGWSA NMYTFASDLF PRNVVASVTG IGGMFGTVGG ILLALLAGRI ITAFGYLPMF IVASCSYLIA LILIHLILPK LEPVKTEELM GDYMVDSKQ
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