| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1027 |
|---|
| Symbol | |
|---|
| ID | 8724757 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 1247536 |
|---|
| End bp | 1248762 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | glycosyl transferase family 2 |
|---|
| Protein accession | YP_003385877 |
|---|
| Protein GI | 284035947 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.379945 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCAAT TTTTACTTAT CTTATGTTTA GGTTTGCTTG CGTATACGTA TGCAGGCTAC
GGAATCCTAC TCCTATTGGC GGTTAAGATC CAGAATTTGT TTAAACGGAC CTCTGTCATT
GCAGACCATT CCGACTACAC CCCTTCGGTA ACCCTGGTCA TCTATGCTTA TAACCATATA
GTCAATCTAC CAGCCAAACT ACAGAATTGT TATTCGCTGG ACTACCCTAC CGATAAACTC
CGGTTTCTGT TCATCACCCA GGGATCGATT GATGGGTCGA CGGAATGGAT GGAATCGTTA
CGCGATGACT GCGCGCGGCA GCTTGATGTG CAGGGAGGAT CGAAGCCCGG CAGCAAAGCC
GCAGCTATGA ATTGCGCGAT GCAGACTGTT ACATCGCCAA TTGTCATTTT CAGCGACGTC
AATACGCAAC TAAACAGGCT AACGATCCGT AACCTGGTCC GGCACTTTCA GGATGAACGG
GTAGGAGTCG TAGCAGGCGA AAAATACATT GAGGCTGATA CCGATGAAGC AGCTTCGGGG
CCGGAAAACC AGTTGTTCCG GGCCTGCGAA TCGTACTTGT ACCAACAAGA TGCCCGGTTT
CCTAAAGTCG TTGGTACCGT CAGCGCCTTA CTTGCGATGC GGACTAAACT CTATGAAGCC
ATTGAGCCAG ATACGCTGCT GGTTAATTTT ACGCTATCCA TGCGCCTTGT TGCGCAAGGA
CACCGAATAG TGTACGAGCC CAGCGCCTAT ACGCAGCAGC GACCTGTATA TTCGATTGAA
AAAGAGCTAA AGCGGGCAGT TGAGCTGTCA ACTGCTCGCT TCCAGTCCAC AATGCGTTTA
CTGCATTTAC TTAACATAAC CCGTTATGGC TGGCTTTCCT TTCACTATAC TTCGCAATGG
GTGCTGCGGT GGGTGGTAGC TCCTTTTTGT CTGCCTTCGA TTTTGCTCAT CGATCTGGCA
TTGCTTTTCT CTGCGCAGTC CCAGCCAAAT CAATCATCTG TTTGGACTCT GCTTTTCGCA
ATTCAGTGTA TGTTTTACAG CCTTTCGTAT ATAGGCTATC GGGCAAAAGG TAAGCACAGA
CGGTTCAGTG TAGTTGGCTT CCCACTCTAC ATCACCTTTA TGAGCATTTG CGGTATTCAG
GGCTTTGTTC GTTACTGGAG AAACAACCCG GCCGGCACCT GGAACAAAGC CCGGCCTATC
GACGACATTG AACTGCAAGC AAGTTAG
|
|---|
| Protein sequence | MLQFLLILCL GLLAYTYAGY GILLLLAVKI QNLFKRTSVI ADHSDYTPSV TLVIYAYNHI
VNLPAKLQNC YSLDYPTDKL RFLFITQGSI DGSTEWMESL RDDCARQLDV QGGSKPGSKA
AAMNCAMQTV TSPIVIFSDV NTQLNRLTIR NLVRHFQDER VGVVAGEKYI EADTDEAASG
PENQLFRACE SYLYQQDARF PKVVGTVSAL LAMRTKLYEA IEPDTLLVNF TLSMRLVAQG
HRIVYEPSAY TQQRPVYSIE KELKRAVELS TARFQSTMRL LHLLNITRYG WLSFHYTSQW
VLRWVVAPFC LPSILLIDLA LLFSAQSQPN QSSVWTLLFA IQCMFYSLSY IGYRAKGKHR
RFSVVGFPLY ITFMSICGIQ GFVRYWRNNP AGTWNKARPI DDIELQAS
|
|---|
| |