Gene Slin_1022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1022 
Symbol 
ID8724752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1239720 
End bp1240346 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content55% 
IMG OID 
ProductNUDIX hydrolase 
Protein accessionYP_003385872 
Protein GI284035942 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0568169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGGCA CCAGCTTTCA CACCTTCTCT GAACATTTGC GCCAACGCTT ACAAAAGCCT 
TTGCCTGGTG AAGACGCCCA TAAAAAAATG GCGTCGACAG CCCGGTATCG GCTCGGTATT
AAACCGAATG AGCGGACGCG CCGGAGTGCG GTGCTGATTT GCTTTTACCC GTATCAGAAC
TCGATTTATC TGCCCCTGAT TCTCAGGCCT CAATATGACG GCGTTCATGC CGGGCAGATG
GCTTTCCCGG GTGGACGGAT GGAGCGTATT GACGAAAACC TCACGCGCAC GGCCCTACGG
GAAGCACAGG AAGAGGTAGG CATTCGGGTG TCTGACGTGA AAGTGCTGGG CCTGCTGACT
GAATTGTACA TCCCTCCCAG TAACTTCTAC GTTCAGCCGG TGGTAGGCGT ACTGCCCTAT
CGACCGGACT TTTACCCGGA CCCTCGCGAA GTAGAGGCCG TCGTGGAAGT GGACCTGGAT
ACCCTGCTGG ACGAAACCAT CGTTGGCGAC AGTCAGATCG ACGTCCGGGG TGTAACGGTC
GACGCCCCTT TTTATCAAAT ACAGGGATAC CGGATTTGGG GGGCTACAGC AATGATGATC
AGCGAACTGC TCATGGTCAT CGACTAG
 
Protein sequence
MIGTSFHTFS EHLRQRLQKP LPGEDAHKKM ASTARYRLGI KPNERTRRSA VLICFYPYQN 
SIYLPLILRP QYDGVHAGQM AFPGGRMERI DENLTRTALR EAQEEVGIRV SDVKVLGLLT
ELYIPPSNFY VQPVVGVLPY RPDFYPDPRE VEAVVEVDLD TLLDETIVGD SQIDVRGVTV
DAPFYQIQGY RIWGATAMMI SELLMVID