| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0941 |
|---|
| Symbol | |
|---|
| ID | 8724671 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 1133873 |
|---|
| End bp | 1134277 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, HxlR family |
|---|
| Protein accession | YP_003385791 |
|---|
| Protein GI | 284035861 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.824933 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.442386 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACAA CCCTTGAAGT AACCCCTCCT CCTGTCAATG GTATACGTCC CATCCATTCC
GCAGCCGAAT GTACACAGAG CGCACAGGCT GTTCAGGACG CCCTCTATGT CCTGAGCGGT
AAGTGGAAGC TCCCGATTAT CGTTTCGTTG AGCGCTGGCC CCAAACGCTT CGGCGAATTG
CAGCGACTGG TAAAAGGTAT AACGGCCAAA GTCCTCAGCA AAGAACTAAA AGAACTGGAG
ATGAATGAAT TTGCCGTTCG GCGTGTCTAC GCCACCATAC CCGTTACGGT CGAATATGAA
CTGACTGAAT ACAGCCAGTC GCTAAATAGC ATTATCGAAG CCTTACGCGA CTGGGGCATT
CAGCACCGCG CCCGGATACT GGGGAAAAGC AAAGCTGTCG GCTAA
|
|---|
| Protein sequence | MSTTLEVTPP PVNGIRPIHS AAECTQSAQA VQDALYVLSG KWKLPIIVSL SAGPKRFGEL
QRLVKGITAK VLSKELKELE MNEFAVRRVY ATIPVTVEYE LTEYSQSLNS IIEALRDWGI
QHRARILGKS KAVG
|
|---|
| |