Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0893 |
Symbol | |
ID | 8724623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1067090 |
End bp | 1067845 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003385746 |
Protein GI | 284035816 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACATT TGGTATTTTT TCTCTTAACA ATAAGTGTAC TCTTCGACAT AAGTATACAA ACAGCGGCTG GCGACACCTT ACCAACAGGT ATCGAAAGCC AACCAAATGA CGATACCGTT CGCACCTTTT CAGTAAAAAC GTTTGATAGA GTACGAATTA CCGGTCCTTT TGTTGTGACG ATCATGGGTG GCAATTCATT TTCCGTCAAG GCTTCAGGTC CCTCCCTGGA TCTCGGCGCT ATGGCTATCA GTAGCCAAAA CGGCACATTA CTCGTTCAGT ACACACCGGT CAAGAGGAGT GAAAATCCAA ACATTGATCA TGGGGTTGTC ACCGTGAGAA TCACGCTGCC GATACTCAAA AAAGCTGAGT TCATGGAGTT AACCCGTTTT TCAATCAAGG GCTTTAATGA GCTGGAATAT CTTGACTTGA TAGCCAGCGA CATGGCCAAT GGATTTGCGG AAGTGAATGC CAGGAATCTG CGATTTACAG TGCATCAACT GTCATCACTT GTCGTCCAGG GTGAGTCAGA CAGGCTAAAG GCTTATTTGC AAGGAAAGTC TACCTTGAAG AGCTATGGTC TAAAAGTTCA CTCTGCGGCT ATAACGGCGG ATGGTATGAG TAAAGCAGAG GTATATGCTT CAGAGACATT GGATGTCACG GCTACTGGAA TGAGCAATGT CGCATACAAA GGCAGCCCGA CGATACGAGT GGATAGTGAT AGAGGGAGCC TCATAAAAGC TGAACCTATT AAATGA
|
Protein sequence | MKHLVFFLLT ISVLFDISIQ TAAGDTLPTG IESQPNDDTV RTFSVKTFDR VRITGPFVVT IMGGNSFSVK ASGPSLDLGA MAISSQNGTL LVQYTPVKRS ENPNIDHGVV TVRITLPILK KAEFMELTRF SIKGFNELEY LDLIASDMAN GFAEVNARNL RFTVHQLSSL VVQGESDRLK AYLQGKSTLK SYGLKVHSAA ITADGMSKAE VYASETLDVT ATGMSNVAYK GSPTIRVDSD RGSLIKAEPI K
|
| |