Gene Slin_0893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0893 
Symbol 
ID8724623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1067090 
End bp1067845 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content45% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003385746 
Protein GI284035816 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACATT TGGTATTTTT TCTCTTAACA ATAAGTGTAC TCTTCGACAT AAGTATACAA 
ACAGCGGCTG GCGACACCTT ACCAACAGGT ATCGAAAGCC AACCAAATGA CGATACCGTT
CGCACCTTTT CAGTAAAAAC GTTTGATAGA GTACGAATTA CCGGTCCTTT TGTTGTGACG
ATCATGGGTG GCAATTCATT TTCCGTCAAG GCTTCAGGTC CCTCCCTGGA TCTCGGCGCT
ATGGCTATCA GTAGCCAAAA CGGCACATTA CTCGTTCAGT ACACACCGGT CAAGAGGAGT
GAAAATCCAA ACATTGATCA TGGGGTTGTC ACCGTGAGAA TCACGCTGCC GATACTCAAA
AAAGCTGAGT TCATGGAGTT AACCCGTTTT TCAATCAAGG GCTTTAATGA GCTGGAATAT
CTTGACTTGA TAGCCAGCGA CATGGCCAAT GGATTTGCGG AAGTGAATGC CAGGAATCTG
CGATTTACAG TGCATCAACT GTCATCACTT GTCGTCCAGG GTGAGTCAGA CAGGCTAAAG
GCTTATTTGC AAGGAAAGTC TACCTTGAAG AGCTATGGTC TAAAAGTTCA CTCTGCGGCT
ATAACGGCGG ATGGTATGAG TAAAGCAGAG GTATATGCTT CAGAGACATT GGATGTCACG
GCTACTGGAA TGAGCAATGT CGCATACAAA GGCAGCCCGA CGATACGAGT GGATAGTGAT
AGAGGGAGCC TCATAAAAGC TGAACCTATT AAATGA
 
Protein sequence
MKHLVFFLLT ISVLFDISIQ TAAGDTLPTG IESQPNDDTV RTFSVKTFDR VRITGPFVVT 
IMGGNSFSVK ASGPSLDLGA MAISSQNGTL LVQYTPVKRS ENPNIDHGVV TVRITLPILK
KAEFMELTRF SIKGFNELEY LDLIASDMAN GFAEVNARNL RFTVHQLSSL VVQGESDRLK
AYLQGKSTLK SYGLKVHSAA ITADGMSKAE VYASETLDVT ATGMSNVAYK GSPTIRVDSD
RGSLIKAEPI K