Gene Slin_0889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0889 
Symbol 
ID8724619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1062191 
End bp1062925 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content50% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003385742 
Protein GI284035812 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGTCG AACAAATATC GGGTCTCACC AATCGGCATG ACTCATACAG CGACGAGATG 
CAGGAAATTA TCGGTCACGT TCCCCACTGG CTTATCCGGT GGGGCAACGT GGTTATTTTC
GCTGTTATTG CTCTGTTGCT GTTAACCGCG CATACTGTGC GCTATCCTGA CGTGATCATG
GCGCAGGCAC TGATCAACGC ACGTGACCAA CCCCAAAAAG TGACCTGGTT CATCTCCGAC
CCGAATGTAA CCTACCGCCC CAACATCCGC GACGGTCAAC AGGTCAGGCT TGGTGACACC
TTGATTTCTG AAGTTGACAG GAGCCGAAAA CTAGTAACTC CCGTTCGCGC CCTCGTGTCC
GGCCGAACGT ACTTATTAAA AGGCGTTGAT AATAATCCCA AAGCGTTTAT GCTGCTCGTC
GTTCCTCCAG TAACGCAATA CGAAGTTCAG CTTAAATTGC CCCTTAAAGG AGCGGGAAAA
GTCAACGCCG GCCAGCGCGT ATTGATTCGG CTGGATGCCT ATCCCAGCAA TGAGTTCGGT
TTTCTGGAAG GCCAGATCGT CAACATGGTT CCCGTATCAC TGGATAACCA CTACCGAGCC
AACGTAAAAC TGACTCGGGG GCTAATTACG AATATGGGAA ACATATTGCC GGTGCAACCC
CTTTTGCAGG GAACTGCCGA AATTATGCTG GATAACAAAC GTCTAACCCA ACGGATATTT
GCCACTTTAT TTTGA
 
Protein sequence
MPVEQISGLT NRHDSYSDEM QEIIGHVPHW LIRWGNVVIF AVIALLLLTA HTVRYPDVIM 
AQALINARDQ PQKVTWFISD PNVTYRPNIR DGQQVRLGDT LISEVDRSRK LVTPVRALVS
GRTYLLKGVD NNPKAFMLLV VPPVTQYEVQ LKLPLKGAGK VNAGQRVLIR LDAYPSNEFG
FLEGQIVNMV PVSLDNHYRA NVKLTRGLIT NMGNILPVQP LLQGTAEIML DNKRLTQRIF
ATLF